VB013: source code

Fig. 2a

Fig. 2a: R code [MD]

RNA-Seq analysis

code:

preprocessing: [MD]

input:

non-normalized (raw) gene counts: [CSV]
sample annotation: [XLSX]
alignment QC metrics: [TSV]
Rhesus Mmul_8 genome annoation: [GTF]

output:

raw SeqExpressionSet: [RDA]
normalized SeqExpressionSet: [RDA]
pre-vaccination substracted SeqExpressionSet: [RDA]
DGEGLM list: [RDA], [RDA]