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Faster cluster matrix creation #850

Faster cluster matrix creation

Faster cluster matrix creation #850

Workflow file for this run

name: Windows
on:
push:
branches:
- '*'
tags-ignore:
- '*'
pull_request:
env:
PERL5LIB: c:\cx\lib\perl5
PERL_LOCAL_LIB_ROOT: c:/cx
PERL_MB_OPT: --install_base C:/cx
PERL_MM_OPT: INSTALL_BASE=C:/cx
#ALIEN_BUILD_PRELOAD: Fetch::Cache
AUTOMATED_TESTING: 1
jobs:
perl:
runs-on: windows-latest
steps:
- uses: actions/checkout@v3
- name: Set up Perl
run: |
choco install strawberryperl
echo "C:\strawberry\c\bin;C:\strawberry\perl\site\bin;C:\strawberry\perl\bin" | Out-File -FilePath $env:GITHUB_PATH -Encoding utf8 -Append
##echo $env:PATH
#- name: Check path
# run: |
# echo $env:PATH
# echo "glargglarg"
# echo $GITHUB_PATH
# echo "zogzogzog"
# $env:PATH = "C:\strawberry\c\bin;C:\strawberry\perl\site\bin;C:\strawberry\perl\bin;$env:PATH"
# echo $env:PATH
# echo "zigzig"
# echo "C:\strawberry\c\bin;C:\strawberry\perl\site\bin;C:\strawberry\perl\bin;$env:PATH" > $GITHUB_PATH
# echo $GITHUB_PATH
- name: perl -V
run: perl -V
- name: Prepare for CPAN cache
run: |
perl -V > perlversion.txt
echo "20220920" >> perlversion.txt
dir perlversion.txt
- name: Cache CPAN modules
uses: actions/cache@v3
with:
path: c:\cx
key: ${{ runner.os }}-build-${{ hashFiles('perlversion.txt') }}
restore-keys: |
${{ runner.os }}-build-${{ hashFiles('perlversion.txt') }}
- name: Prepare for Alien cache
run: |
perl -V > aliencache.txt
echo 'aliens' >> aliencache.txt
dir aliencache.txt
- name: Cache Alien downloads
uses: actions/cache@v3
with:
path: $HOMEPATH\.alienbuild
key: ${{ runner.os }}-build-${{ hashFiles('aliencache.txt') }}
restore-keys: |
${{ runner.os }}-build-${{ hashFiles('aliencache.txt') }}
#- name: Install Dependencies
# run: curl -sL https://git.io/cpm | perl - install -g --show-build-log-on-failure
#- name: Install dependencies 1
# run: |
# #cpanm --notest local::lib
# #eval "$(perl -Mlocal::lib=${PWD}/perl_modules)"
# cpanm --quiet --notest Alien::Build
# cpanm --quiet --notest Alien::Build::MM
# cpanm --quiet --notest Sort::Versions
# cpanm --quiet --notest PkgConfig
# cpanm --quiet --notest Alien::Build::Plugin::Cleanse::BuildDir
# cpanm --quiet --notest File::Find::Rule
# cpanm --quiet --notest Alien::Build::Plugin::Fetch::Cache
# cpanm --quiet --notest Env::ShellWords
# cpanm --quiet --notest Test2::Suite
- name: Install dependencies Alien::MSYS
run: |
cpanm Alien::Build::Plugin::Fetch::Cache
cpanm --notest Alien::MSYS
- name: Install dependencies Alien::sqlite
run: |
echo $env:PATH
cpanm --notest --installdeps Alien::sqlite
cpanm -v Alien::sqlite~1.05
- name: Install dependencies Alien::proj
run: |
#cpanm -v --notest https://github.com/shawnlaffan/perl-alien-proj.git
cpanm --notest --installdeps Alien::proj
cpanm -v --notest Alien::proj
- name: Install dependencies Alien::geos::af
run: |
cpanm --notest --installdeps Alien::geos::af
cpanm -v Alien::geos::af
- name: Install dependencies Alien::gdal
run: |
cpanm --notest --installdeps Alien::gdal
echo "ALIEN_GDAL_CONFIG_ARGS=--with-hide_internal_symbols" | Out-File -FilePath $env:GITHUB_ENV -Encoding utf8 -Append
# qhull issues on gdal 3.5, maybe fixed in 3.6
$env:ALIEN_GDAL_CONFIG_ARGS = "--with-hide-internal-symbols=yes --without-gnm --without-qhull"
Get-PSDrive C | Select-Object Used,Free
# clunky path override
# $env:PATH = "C:\strawberry\c\bin;C:\strawberry\perl\site\bin;C:\strawberry\perl\bin;$env:PATH"
cpanm -v Alien::gdal
Get-PSDrive C | Select-Object Used,Free
- name: Install task deps
run: |
#cpanm --notest Task::Biodiverse::NoGUI
cpanm --notest --no-man-pages PDL
cpanm --notest --installdeps .
cpanm --installdeps .
# Runs a set of commands using the runners shell
- name: Run tests
run: |
prove