From 7a16eacf64dea5f9f1cf5c03226626ee22a7a180 Mon Sep 17 00:00:00 2001 From: sigven Date: Thu, 23 Nov 2017 22:35:44 +0100 Subject: [PATCH] changed README --- README.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/README.md b/README.md index 3cbc328..99fcae5 100755 --- a/README.md +++ b/README.md @@ -1,4 +1,4 @@ -# vcf2tsv +# Genomic VCF to tab-separated values __Python script for conversion of VCF data to tab-separated values (TSV)__ A small script that converts genomic variant data encoded in VCF format into a tab-separated values file. The script utilizes [brentp/cyvcf2](https://github.com/brentp/cyvcf2) to parse the VCF file. By default, the program prints the fixed VCF columns, all INFO tag values (as defined in the VCF header, INFO tags not present in a given record is appended with a '.'), and all genotype data (FORMAT columns) for heterozygotes and homozygotes. If genotype data is present, it prints one line per sample, and a column denoted VCF\_SAMPLE_ID indicates data for a given sample. The script has optional arguments to