v3.23.0

3.23.0 (2023-04-13)

Features

• handle umis (#213) (61c54e0)
• Improved handling of custom annotation fields (#221) (540f993)

Bug Fixes

• prenthesize combined filter expressions (#214) (fae1b0c)
• update mark_duplicates to newest wrapper syntax (#217) (9d3dd30)

v3.22.0

3.22.0 (2023-03-01)

Features

• Add datavzrd fields (#209) (142ead7)

Bug Fixes

• explicitly use categorical type for chi2 testing (#210) (079c756)
• use varlociraptor 6.0 with its new smart FDR control. This leads to improved filtration results with less false negatives (#212) (cb00c33)

v3.21.1

3.21.1 (2023-02-17)

Bug Fixes

• fix typo when retrieving candidate filter expression (dd1e661)

v3.21.0

3.21.0 (2023-02-17)

Features

• Plot simple observations (#201) (c940ec5)
• Set excluded regions for delly (#203) (3688ea8)

Bug Fixes

• properly handle complex candidate filter expressions including aux files (#205) (6e353f7)

Performance Improvements

• update to varlociraptor 5.10.0 (#207) (076cf4e)
• update to varlociraptor 5.9 (#200) (38135f2)

v3.20.1

3.20.1 (2023-02-14)

Bug Fixes

• properly handle missing candidate filter (#199) (bdec1a0)

v3.20.0

3.20.0 (2023-02-10)

Features

• add ability to use aux-files for candidate filtering (80f0ba9)

Performance Improvements

• update to varlociraptor 5.8.0 (b15cd85)

v3.19.6

3.19.6 (2023-02-01)

Bug Fixes

• provide fasta to vep wrapper, update to latest vep wrapper (814eee3)
• update to latest vep cache wrapper in order to avoid another proxy problem (8f9d1a2)

v3.19.5

3.19.5 (2023-01-30)

Bug Fixes

• resource download fixes (proxy support for get_vep_cache, curl deployment for download_revel) (#195) (9e250c6)

v3.19.4

3.19.4 (2023-01-23)

Fixes

• update to Varlociraptor 5.6.2

v3.19.3

3.19.3 (2023-01-15)

Performance Improvements

• update to varlociraptor 5.6.1 (#189) (4c34c84)