Database of Ig gene usage in naive and memory B-cell compartments of healthy humans
Data from two studies is compiled here:
- Tucci, 2018 (n=7) [https://doi.org/10.1182/blood-2017-09-805762]
- Ghraichy, 2020 (n=53) [https://doi.org/10.3389/fimmu.2020.01734]
d <- read.csv("DB.csv")
head(DB)
gene_name gene_type productive cell_type chain study
1-18 IGHV TRUE CD5 IgH Tucci_2018
1-2 IGHV TRUE CD5 IgH Tucci_2018
1-24 IGHV TRUE CD5 IgH Tucci_2018
1-3 IGHV TRUE CD5 IgH Tucci_2018
1-45 IGHV TRUE CD5 IgH Tucci_2018
1-46 IGHV TRUE CD5 IgH Tucci_2018
study_doi study_n prob_mean prob_L95 prob_H95
https://doi.org/10.1182/blood-2017-09-805762 n=7 0.017 0.014 0.020
https://doi.org/10.1182/blood-2017-09-805762 n=7 0.033 0.028 0.038
https://doi.org/10.1182/blood-2017-09-805762 n=7 0.003 0.002 0.004
https://doi.org/10.1182/blood-2017-09-805762 n=7 0.023 0.019 0.027
https://doi.org/10.1182/blood-2017-09-805762 n=7 0.004 0.003 0.005
https://doi.org/10.1182/blood-2017-09-805762 n=7 0.012 0.010 0.014