-
Notifications
You must be signed in to change notification settings - Fork 6
/
MD5
246 lines (246 loc) · 13.1 KB
/
MD5
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
0e7c1f882c8ab8d70eee04411e6ee6a9 *DESCRIPTION
6d6ba9f4a4107291b5718d7422a5abaf *NAMESPACE
c4762e51edd4b0a8085b553b829fcb44 *NEWS
7d0e5a93868a77976c232932b0a5cf3c *R/Cmeasures.R
ea152fa392691f9b73e52466474ab42d *R/Diffepoce.R
568ccb7a37705e70ed4b5259016fd74c *R/SurvIC.R
22a51f282910f3a2f0cdc323d719165e *R/additivePenal.R
4b14a9a2e235c0d277422b8e0cf6afba *R/cindexes.B.R
72ad99e0d9c69327137ce7c210043232 *R/cindexes.R
21f3230d8a6d7348f3adcd33685aae76 *R/cindexes.W.R
714c85bd3fe67d76da4d0cdf90f742dd *R/cindexes.frailty.R
080969f7afe950d17921167c312653c0 *R/cluster.R
f56a0a92e485a448dbed35925d97d34d *R/epoce.R
6787bc9cea9288aa53d85a380eb041d4 *R/event2.R
eee9f7375e47c491fc37bc6257c0a5ca *R/factor.names.R
7ce5e24b4268a870dcdcf73eee578e04 *R/firstlib.R
e7c2cba377de211be883bdb4a6b76dd5 *R/frailtyPenal.R
0ef4f55c1be5c9d8e236100ca1cd5230 *R/hazard.R
12b7eed3f5458f17a8d780b2e8772cd6 *R/lines.frailtyPenal.R
8d43a0e50b5a1b4fe930ba50df8d53ff *R/longiPenal.R
7cc3cb457b3048ab6d8eb11f6d3eb8c6 *R/multivPenal.R
0e5d560f9066b9625cb00e77e3c75b77 *R/num.id.R
262f57523e0d8c716e6cc72df76f40b3 *R/plot.Diffepoce.R
35cb96592a02652a15826167927bd5d8 *R/plot.epoce.R
58adca1dcdc9645d19b0af7957251239 *R/plot.frailtyPenal.R
47090b2cbb958a9384aab24c04abb8e7 *R/plot.jointNestedPenal.R
b9fd669d5c666369e8930099f3ef4826 *R/plot.jointPenal.R
b4feb92b9115ab7de721aebcd82ca6a4 *R/plot.longiPenal.R
535190656b420bd913a435e0615bc9e7 *R/plot.multivPenal.R
d6f933150fbb5850274979a9f02455ab *R/plot.nestedPenal.additivePenal.R
a25640b786ba52c043f97aed6a8036ba *R/plot.predFrailty.R
2cf2dcc866da48db106f1f8b49120bbf *R/plot.predJoint.R
2bc47388268a169295d8adfdb0668781 *R/plot.predJointNested.R
2a8dc4d511435a64c16a1edef189ce61 *R/plot.predLongi.R
9fc524277dd9b281ddfcef76037a068a *R/plot.trivPenal.R
1636e40e0dca79ded8de75c37e68ef78 *R/plot.trivPenalNL.R
ebc9df82dd08c43f22c202036ec30dd6 *R/prediction.R
79a06e0faff389cb54f0e7191eac06dd *R/print.Cmeasures.R
8ed4f036c28da23399e7037d84935b4a *R/print.Diffepoce.R
109a4e813415d33ba93b196a4bf43747 *R/print.additivePenal.R
4b9e66956f84fb4a8355eef46e597614 *R/print.epoce.R
c978fdfd49503bc1bd647335937a7c4d *R/print.frailtyPenal.R
539bac2e144409ad22393d9f4edca9a3 *R/print.jointNestedPenal.R
fd9f0bce905f7a9d0d21184ba8282b01 *R/print.jointPenal.R
90a5caa582c4e2d1bd0cf9841acb3e25 *R/print.longiPenal.R
9ec093bc452e02f764ad922c82f83fe0 *R/print.multivPenal.R
5ce5f410bb6d23dd0a7adeab939e21d8 *R/print.nestedPenal.R
65188bcf05f3fc11a9cd802c1f336e55 *R/print.predFrailty.R
fbaf45f15700529123c85890e691e37d *R/print.predJoint.R
dfbb3c564265718263dfca8997e84dfc *R/print.predJointNested.R
8c5257c63dbbb4d72003cceb8054c586 *R/print.predLongi.R
9d4811980025526bf18fac8b8acff650 *R/print.trivPenal.R
b39e54aae5e2a909d942481cf4f0f104 *R/print.trivPenalNL.R
2bc71d3cf5e7863eff53097209c03599 *R/slope.R
f6cacde0f4e2a7a804882d76cc347ea5 *R/statFP.R
a6b1c7e1dc0e012b31e0c4904ba89ba9 *R/subcluster.R
8da970d13b0b9162d9a614294d812eca *R/summary.additivePenal.R
362e55155a930cef83f37af19a5ccdf1 *R/summary.frailtyPenal.R
eb6ca61df5d9e7349a370313cc2344c9 *R/summary.jointNestedPenal.R
524c1088f78e1f9c69201343c554e26d *R/summary.jointPenal.R
24bd29e258545d2e4a5da86496264935 *R/summary.longiPenal.R
dccbb494e6860b8642e6e74246bc1a5b *R/summary.multivPenal.R
21a401986b707c77a073a1950ea51c5a *R/summary.nestedPenal.R
a5da8c50ab1d05d4e07cb6b5cea91834 *R/summary.trivPenal.R
2e4446e1b6036d39242b0c70a13aaaa1 *R/summary.trivPenalNL.R
1cb42f9e363042b0b731b749f63a2d0a *R/survival.R
05be8332f7bd2046188dc25589965538 *R/terminal.R
be43d7d38dcd4d608ddfad32b761153a *R/timedep.R
c39ea378ab6d22cd840a88d16b3f9917 *R/timedep.names.R
71b23e6fe002480a622e27e30c860782 *R/transfo.table.R
ac3e77d967e6bf5e24fc42cb768d67f5 *R/trivPenal.R
143e26161a50fcd0fb34c18effa0eb06 *R/trivPenalNL.R
c4c6c8f56f0fb125a9f0ad5f36a78a9d *R/waldtest.R
33509771cad95e89a2fd0f567007e559 *R/wts.R
c4501c422e7df81ab0256289663bd032 *README
fca5ecd90d6f651c93aeb8149b9ea984 *THANKS
3b8782b194b5368fbaa69939d938cde0 *build/vignette.rds
f9b9c4d9d73247b5e38d320cd587b621 *data/bcos.rda
52d2b2b6fa8d5b2ef44badfdf80b509c *data/colorectal.rda
01559782d363c615311c70ccda768add *data/colorectalLongi.rda
0aaff38c38b72647712069d781f31a2a *data/dataAdditive.rda
313a4bc912d2f2342c22049e895a287a *data/dataMultiv.rda
e08f127154103582c05bd755cbee0e1e *data/dataNCC.rda
be6e167944b7ee30df6f022df7103111 *data/dataNested.rda
b81af115c94af71ee49b52dba2379e77 *data/readmission.rda
f682dcc9f668a63c45d8482d3d8da39a *demo/00Index
8d790b511b0de1b9cdc75e5c1a905ee5 *demo/frailtypack_additivePenal.R
e5c3f976a2fb76b2e59ff5a9a46aabf5 *demo/frailtypack_frailtyPenal.R
fcb199ccc422257918c4b706ac63362a *demo/frailtypack_jointPenal.R
4af5fd879b04c8a98172646fefa04111 *demo/frailtypack_multivPenal.R
ff5bcb421316a8fb4e02f18802c304b1 *demo/frailtypack_nestedPenal.R
b65669f1f534afa6d64dfc7a7e30fdbb *inst/CITATION
68987efeb5143d163e5bf8eae76b6b53 *inst/doc/Package_summary.Rmd
1bfbfe56b03b0b04b985630d26f36948 *inst/doc/Package_summary.html
95837cac8328128337bae3b1db128460 *man/Cmeasures.Rd
3a4757eb26b71766e726c189d5d6ccb2 *man/Diffepoce.Rd
d26434525880100bb1f6264acb4b6227 *man/SurvIC.Rd
535595ac88d1cd9c18ce2ddfa2fe5519 *man/additivePenal.Rd
497d7b663a17c9b16d18356f000b154b *man/bcos.Rd
70012d474a1b02066a905c318cc720d6 *man/cluster.Rd
e5d42ad40c83520b95a22d46089f20bb *man/colorectal.Rd
669328a3ce30419481fa07d2f1717a52 *man/colorectalLongi.Rd
f810af7f668a353514b34f9f703ab96b *man/dataAdditive.Rd
ee3726d56a71f646f361724b98f4e909 *man/dataMultiv.Rd
8cf7c68c65115c059805e7f76e5c26be *man/dataNCC.Rd
ee09dd17f2adfa71971b760793956bfa *man/dataNested.Rd
b4f74f24d8584970eef93c7363adac3a *man/epoce.Rd
c35befa1ad0be10544261074dfb2216a *man/event2.Rd
efc8097a127aa4204aa6522775b9dcda *man/frailtyPenal.Rd
d086a89e3aed53dbc6a65cfb0c157140 *man/frailtypack-package.Rd
a7ea7e149c4a36d2a9dadd438a066c4b *man/hazard.Rd
265ab483b7f0c2d0e4578e9245e91427 *man/longiPenal.Rd
4d57badb32432a65fd34c0b7ca9526a5 *man/multivPenal.Rd
95405af282c36913b5e48b454589b5c0 *man/num.id.Rd
d13649e4e3b8b4c7961f3e299d16d20a *man/plot.Diffepoce.Rd
014d300874b9be26136ce7b5ee4deed2 *man/plot.epoce.Rd
947545225e629a5250f874c2762c75fe *man/plot.multivPenal.Rd
a306fe88a42da34ddfb76988144c7f64 *man/plot.predFrailty.Rd
c945d1cabce560a469669ac41214c2fb *man/plot.predJoint.Rd
ce8c3da1df58216adb294204d23cbb02 *man/plot.predLongi.Rd
f82a0369582fa5c382cc8fe0967c0fae *man/plotAdditive.Rd
b8295dbf17be5eae8cfc3e9a4c3d1d0d *man/plotFrailtyPenal.Rd
0c21c0fca75297e52ced4e920d5b72a7 *man/plotJointNestedPenal.Rd
a6def62fbf0e745d65bbae2b5917534d *man/plotJointPenal.Rd
2dbaf430308aa463e390c739f6241d85 *man/plotLongiPenal.Rd
9dda4d82818e4b3bbb00de10948e72ba *man/plotNestedPenal.Rd
c75be3cddf940743e5e9925db8430eef *man/plotTrivPenal.Rd
29fd250dc4267f1dff13607a5c19ac1b *man/plotTrivPenalNL.Rd
14e70923612f986ed80305e455bc98df *man/prediction.Rd
66e0fbe84977b89a1548c9ac36d49bce *man/print.Cmeasures.Rd
5d71930b4531bd0c0dae3bc5256df22b *man/print.multivPenal.Rd
a63e28efa395a3ffbd574e1e3adcc673 *man/print.prediction.Rd
e22e943d616d6380fb6ae5999da17f69 *man/printAdditive.Rd
a681ef188dad3a74ff3bc01f213d15d0 *man/printFrailtyPenal.Rd
fc8e89ce31d420e2a85caaf2d7bd5dca *man/printJointNestedPenal.Rd
ba72cbb04e9d22c28a398712bdc4f153 *man/printJointPenal.Rd
bf91b70fdae41a1cd164bf60ccf4c195 *man/printLongiPenal.Rd
e134cb8e78d9b3281396c8a59fccb4a3 *man/printNestedPenal.Rd
04305fba667cd26e6c68900abb651c76 *man/printTrivPenal.Rd
9138e7b5608e6e261afc3a532c8eec1c *man/printTrivPenalNL.Rd
47159cdfd1f838be859fa3b67986d655 *man/readmission.Rd
3490354c2da8cf583367d77faa478292 *man/slope.Rd
dd9b377747bd9ed1d5ba0c65097bda6f *man/subcluster.Rd
9d0ae4bb887cac78c6bf31de88222e38 *man/summary.multivPenal.Rd
3158abc27d6d4ffa76854eeca92ee9d9 *man/summaryAdditive.Rd
6d3b1b74b7b072dd9ff3813e45c6dcfb *man/summaryFrailtyPenal.Rd
02bb50983f5231e75b6fc849f2b9d19c *man/summaryJointNestedPenal.Rd
7cd1fa824a2274653c4e905e4d239419 *man/summaryJointPenal.Rd
e7338dab983bcd48417852501115238e *man/summaryLongiPenal.Rd
bd6760e0c631200ed33892ece441a4d0 *man/summaryNestedPenal.Rd
e4fdc87de2107f3f8c3443b2afe0dec7 *man/summaryTrivPenal.Rd
4d188602545d67e86b79ff08554e74e8 *man/summaryTrivPenalNL.Rd
08fb0ec9a554fc2fb2b5ba49ce26800c *man/survival.Rd
2b323f5f7348a08cd5a48bb262e3c2c3 *man/terminal.Rd
c5ac4855db4423cf5c19199816fba488 *man/timedep.Rd
b23929710832eb642dc84cac55396617 *man/trivPenal.Rd
6a1b368278b32a43cce38b9ebadac2b1 *man/trivPenalNL.Rd
ed5edd0db13a1bdfd2ddffb9d0abf40d *man/wts.Rd
c6731b9e674376f5339f58c71e3a0fb2 *src/Adonnees.f90
df9317183eb568d5bd8038011c7fa16d *src/AparamMultive.f90
8f9203d866726d4cc037827866fbb9b2 *src/Aparameters.f90
3ec7df67eb0ff4e4d31ffbbec8e181bc *src/Makevars
266766bbd949461ccea88e1b5c4cc8e9 *src/aGhermite.f90
151ad9d06a641e24fed3b2665a3409b3 *src/aaOptim.f90
c333855bf0984cd486390c21dd10221d *src/aaOptimres.f90
6d23683c670162afd72438e333f59f3a *src/aaUseFunction.f90
dab3acc9b4648109cbde82705912b853 *src/aaUseFunctionG.f90
3bb14ea28a201e92f49475bfd4ce9a56 *src/aamarq98o.f90
16f07267abdb20508b20ca4fe35e3032 *src/additive.f90
79cb23fac2fa835e98a917727b73624c *src/afuncpasres.f90
eac76a081d636011889cb5ef1197acf5 *src/ahrmsym.f90
abe0e8b31a36477d38393e1fc7df2ecd *src/aresidusMartingale.f90
0dfda0abc71e2b689de08e64ebb30f83 *src/distance.f90
d9996e1965e51137a04562e8ef1ab012 *src/epoce.f90
ab453cc268abe6b7cff0def8b479c4ab *src/epoce_log.f90
09eb1495a0e689639b211e35885ae4c3 *src/epoce_long.f90
885737113b574920076c08d746a52db2 *src/epoce_long_nl.f90
a251f33c4eeffeaf43918df6258c52ae *src/frailtypack.f90
270a50ab6dfed2875a01d2cb6ea53104 *src/frailtypack.h
55c66453e5eea79af67cc7b76f846023 *src/funcpaG_tps.f90
ad6572b00eaaadfaad287c5e347588cd *src/funcpaGcpm.f90
0006d2d1d2f4acb4b0f7ec09089d1135 *src/funcpaGcpm_intcens.f90
e2e44af25ab499b153a6c6cc832881f0 *src/funcpaGcpm_log.f90
d140ac62b0cffcd0718723e6beae5250 *src/funcpaGsplines.f90
b951ed48ff303c911abae1d940e70129 *src/funcpaGsplines_intcens.f90
be45966fabca69780f32d33ece657698 *src/funcpaGsplines_log.f90
56bb27ba11a138f1bef1e58707b63e2c *src/funcpaGweib.f90
914d48556b21aafe86e525764d714501 *src/funcpaGweib_intcens.f90
5c7d8aa1eebae19d58f3e772bb3a8e92 *src/funcpaGweib_log.f90
55b923901ee74e0c1a8036311f0e5d5e *src/funcpaMultivCpm.f90
e875140e284fd7c15e86f39054fd329f *src/funcpaMultivSplines.f90
8b8520917aff3fc514c30395e785f096 *src/funcpaMultivWeib.f90
42af0ee01bebfbf60475b04b0a9db78d *src/funcpaacpm.f90
802fbdeefeb23c456677566a9224b101 *src/funcpaasplines.f90
bcba67690922f68c0dcfbca542e796b7 *src/funcpaaweib.f90
8a0d553e68e01515989ed1af2ef707a1 *src/funcpaj_tps.f90
f09a1926613410cca62efb32d570da40 *src/funcpajcpm.f90
6185fcbf1006d370dd2fa5427ac1310f *src/funcpajcpm_log.f90
49bdb6f2f5a141eea60b6e06618c1f3f *src/funcpajgeneral.f90
7e53797d0c5c082e25b3c6a5c88bfcc9 *src/funcpajlongisplines.f90
964eb9736aff5b695465f7d8cdffca8c *src/funcpajlongisplines_nl.f90
6c9e7c24c659c53e045443fbeb201e84 *src/funcpajlongiweib.f90
55182015cebab29693904f7ee3ae151a *src/funcpajlongiweib_nl.f90
f480c02d5d8b0ac39266a0a07446d94c *src/funcpajsplines.f90
b67b57981350ba3b8da968d3301e06a8 *src/funcpajsplinesIndiv.f90
8901b99d530fcf33fe9e014b5a03afee *src/funcpajsplines_fam.f90
1a208761a68a0226c51fd9aa2f384b37 *src/funcpajsplines_intcens.f90
e2d494a10e46c3a7eeae2d3b6c26c408 *src/funcpajsplines_log.f90
89aa31a9c0dabf59cda49e8207cb450c *src/funcpajsplines_logIndiv.f90
a70bffbfd616a5cff7e50dba3f87b213 *src/funcpajweib.f90
4fb815230c8b486b965dcc0cd44a4a20 *src/funcpajweib_fam.f90
c2af515ec20217c73640aa05e3b3015d *src/funcpajweib_intcens.f90
fb780b324d433c75c92a738288759952 *src/funcpajweib_log.f90
cd94c886846a85f58b60e6fc67ed3954 *src/funcpalongi_uni.f90
6ce71d2a8f0da6dffb626e5bec0b880c *src/funcpancpm.f90
be2a2df07a4b5065d52d6a73b7585152 *src/funcpansplines.f90
2b97ddab7c9029230ab6ca5ebbcd3835 *src/funcpanweib.f90
c5978d1548c9e574829f1fe4325e5d41 *src/funcpas_tps.f90
1e4ccbac5b302ed07166b4b9a1ad5356 *src/funcpascpm.f90
a9066bca21aa072120e6bcb35e9e4566 *src/funcpascpm_intcens.f90
78130c9a1d0811b6872b41ac6f19ceec *src/funcpascpm_log.f90
7c98796a765bfbb744ce1ca02aa801e9 *src/funcpassplines.f90
5f70cbddb4d42ec72861777d8eb0dd93 *src/funcpassplines_intcens.f90
10b331d9b13db82a17322ee6b10b4537 *src/funcpassplines_log.f90
11391184b35bf7db4f333fab0bbc7a7a *src/funcpasweib.f90
e30e0e7d3062c50f7b1b6570be903a5d *src/funcpasweib_intcens.f90
09e0b16fe331dbe42a745b0c9d72d43c *src/funcpasweib_log.f90
622abccdb6c5b64428fdf5b395a1a50d *src/init.c
0c06908a21f117c1e3c4e723d3d072db *src/joint.f90
1f8137c8efaa0da99862523bf8accb6f *src/joint_longi.f90
09c77947d7e80a85dc8c06e6fce50f86 *src/joint_longi_nl.f90
2b50069c392d0a60f21804c4e8c7f67d *src/longi_uni_nl.f90
1792999dfdc6d2e484178461ccdcebbe *src/multiveJoint.f90
436f383e59f32b5ab24888c52cbf7678 *src/nested.f90
36ef57c3825b58bf8284840926d7495d *src/prediction.f90
9a3b348666aa3755aeab4778808053a9 *src/prediction_Recurr_Sha.f90
708933585722e043e4a472a3dde01c7f *src/prediction_biv.f90
b7f00f0b3cbb4957f90cb745b94160ff *src/prediction_sha_logn.f90
5389e5bab0c093ca87cefbad47dfed8e *src/prediction_tri.f90
3693052488232cf76bf561f503ec23ae *src/prediction_tri_nl.f90
f0b43ca099a92a67ec3bbc92b7710f0a *src/predictionfam.f90
cecbe58ce72b3504d4164ecbc68b799d *src/risque.f90
4049c2ade27987d57e8b0c3953beb24a *src/survival.f90
68987efeb5143d163e5bf8eae76b6b53 *vignettes/Package_summary.Rmd
0deda243021ac0cccf8a4ebe9079ff53 *vignettes/blue_x.png
2b146366e81a7e0f6f9bd3be37ba6b30 *vignettes/orange_x.png