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Run example scripts from ZhaoWenzhao/QHCC in CI #20

Run example scripts from ZhaoWenzhao/QHCC in CI

Run example scripts from ZhaoWenzhao/QHCC in CI #20

Workflow file for this run

name: notebooks
on:
push:
branches:
- main
pull_request:
branches:
- main
jobs:
pypi:
strategy:
fail-fast: false
matrix:
os: ["ubuntu-latest", "macos-13", "windows-latest"]
python-version: ["3.8", "3.9"]
runs-on: ${{ matrix.os }}
name: "${{ matrix.os }} :: pypi :: ${{ matrix.python-version }}"
steps:
- uses: actions/checkout@v4
- uses: actions/setup-python@v5
with:
python-version: ${{ matrix.python-version }}
- if: matrix.os == 'macos-13'
run: brew install libomp
- name: Install dependencies from PyPI
run : |
pip install uv
uv pip install --system -r requirements.txt
- name: Execute example notebooks
run: |
jupyter execute notebooks/example.ipynb
- name: Execute example scripts from ZhaoWenzhao/QHCC
run: |
git clone https://github.com/ZhaoWenzhao/QHCC.git
cd QHCC
python demo_QHCC_XGBoost.py
conda-forge:
strategy:
fail-fast: false
matrix:
os: ["ubuntu-latest", "macos-13"]
runs-on: ${{ matrix.os }}
name: "${{ matrix.os }} :: conda-forge"
timeout-minutes: 15
defaults:
run:
shell: bash -leo pipefail {0}
steps:
- uses: actions/checkout@v4
- uses: mamba-org/setup-micromamba@v2
with:
environment-file: environment.yml
condarc: |
channels:
- conda-forge
- radiomics
- name: Execute example notebooks
run: |
jupyter execute notebooks/example.ipynb
- name: Execute example scripts from ZhaoWenzhao/QHCC
run: |
git clone https://github.com/ZhaoWenzhao/QHCC.git
cd QHCC
python demo_QHCC_XGBoost.py