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@mskcc @NYU-BFX @NYU-Molecular-Pathology

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  1. Bioinformatics Bioinformatics Public

    Bioinformatics analysis scripts, workflows, general code examples

    Shell 53 14

  2. nextflow-demos nextflow-demos Public

    Example Nextflow pipelines and programming techniques

    Nextflow 103 25

  3. NYU-Molecular-Pathology/NGS580-nf NYU-Molecular-Pathology/NGS580-nf Public

    Target exome sequencing analysis for NYU NGS580 gene panel

    Nextflow 10 5

  4. IGV-snapshot-automator IGV-snapshot-automator Public

    Script to automatically create and run IGV snapshot batchscripts

    Python 139 50

  5. NYU-Molecular-Pathology/IR-interpreter NYU-Molecular-Pathology/IR-interpreter Public

    Web app for clinical interpretation of Ion Reporter variant results

    Python 4 2

  6. mskcc/pluto-cwl mskcc/pluto-cwl Public

    CWL workflows for helix filter scripts

    Python 1 6