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ci: adds formal comparison with CrossMap as part of the CI #14

ci: adds formal comparison with CrossMap as part of the CI

ci: adds formal comparison with CrossMap as part of the CI #14

Workflow file for this run

name: Compare
on:
push:
branches:
- main
pull_request:
jobs:
crossmap:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v4
- uses: actions/cache@v4
with:
path: chainfiles
key: ${{ runner.os }}-chainfiles
- name: Update Rust
run: rustup update stable && rustup default stable
- name: Install CrossMap
run: pip install CrossMap
- uses: Swatinem/rust-cache@v2
with:
workspaces: .
- run: |
mkdir -p chainfiles
cargo run --release --features=binaries -- -d chainfiles hg19ToHg38 -vvv | exit 0
ls
ls chainfiles