Add options for spades and virsorter

sunbeam-labs · Oct 14, 2023 · 621f232 · 621f232
1 parent 18bde8a
commit 621f232
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Showing 5 changed files with 400 additions and 8 deletions.
diff --git a/config.yml b/config.yml
@@ -4,4 +4,6 @@ sbx_virus_id:
   bowtie2_build_threads: 4
   cenote_taker2_db: ''
   host_decontam: True
-  include_phages: False
+  include_phages: False
+  use_spades: False # Default: Megahit
+  use_virsorter: False # Default: Cenote-Taker2