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pt.java #447

Merged
merged 161 commits into from
Aug 16, 2024
Merged

pt.java #447

merged 161 commits into from
Aug 16, 2024

Commits on Jul 20, 2024

  1. wip

    @seanmacavaney
    seanmacavaney committed Jul 20, 2024
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  2. Merge remote-tracking branch 'origin/master' into java

    @seanmacavaney
    seanmacavaney committed Jul 20, 2024
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Commits on Jul 21, 2024

  1. integration

    @seanmacavaney
    seanmacavaney committed Jul 21, 2024
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  2. wip

    @seanmacavaney
    seanmacavaney committed Jul 21, 2024
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Commits on Jul 26, 2024

  1. this call no longer needed

    @cmacdonald
    cmacdonald committed Jul 26, 2024
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  2. resolve helper version differently

    @cmacdonald
    cmacdonald committed Jul 26, 2024
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  3. split terrier out into a subpackage

    @seanmacavaney
    seanmacavaney committed Jul 26, 2024
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  4. perhaps a nicer way to maintain a set of classes?

    @seanmacavaney
    seanmacavaney committed Jul 26, 2024
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  5. oops

    @seanmacavaney
    seanmacavaney committed Jul 26, 2024
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  6. move general java stuff to its own subpackage

    @seanmacavaney
    seanmacavaney committed Jul 26, 2024
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  7. move batchretrieve.py -> terrier/retriever.py

    @seanmacavaney
    seanmacavaney committed Jul 26, 2024
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  8. should fix broken build

    @seanmacavaney
    seanmacavaney committed Jul 26, 2024
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  9. wip

    @seanmacavaney
    seanmacavaney committed Jul 26, 2024
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Commits on Jul 27, 2024

  1. fix some tests

    @seanmacavaney
    seanmacavaney committed Jul 27, 2024
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  2. fix more tests

    @seanmacavaney
    seanmacavaney committed Jul 27, 2024
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  3. wip

    @seanmacavaney
    seanmacavaney committed Jul 27, 2024
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  4. new global place for java configurations, allowing them to be passed … 

    …to new processes easier
    @seanmacavaney
    seanmacavaney committed Jul 27, 2024
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  5. fixing a few config errors

    @seanmacavaney
    seanmacavaney committed Jul 27, 2024
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  6. wip

    @seanmacavaney
    seanmacavaney committed Jul 27, 2024
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  7. wip

    @seanmacavaney
    seanmacavaney committed Jul 27, 2024
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  8. wip

    @seanmacavaney
    seanmacavaney committed Jul 27, 2024
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Commits on Jul 28, 2024

  1. debugging messages

    @seanmacavaney
    seanmacavaney committed Jul 28, 2024
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  2. python version compat

    @seanmacavaney
    seanmacavaney committed Jul 28, 2024
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  3. warnings get collapsed?

    @seanmacavaney
    seanmacavaney committed Jul 28, 2024
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  4. debugging

    @seanmacavaney
    seanmacavaney committed Jul 28, 2024
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  5. isolate test failures

    @seanmacavaney
    seanmacavaney committed Jul 28, 2024
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  6. isolate test failures

    @seanmacavaney
    seanmacavaney committed Jul 28, 2024
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  7. isolation

    @seanmacavaney
    seanmacavaney committed Jul 28, 2024
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  8. refactor

    @seanmacavaney
    seanmacavaney committed Jul 28, 2024
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  9. ray test was disabled :(

    @seanmacavaney
    seanmacavaney committed Jul 28, 2024
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  10. uggh so was multiprocess :(

    @seanmacavaney
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  11. wip

    @seanmacavaney
    seanmacavaney committed Jul 28, 2024
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  12. wip

    @seanmacavaney
    seanmacavaney committed Jul 28, 2024
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  13. whoops

    @seanmacavaney
    seanmacavaney committed Jul 28, 2024
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  14. given it works for me, seems to be platform-dependent? Worth trying

    @seanmacavaney
    seanmacavaney committed Jul 28, 2024
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  15. okay, so only breaking on macos-latest. Let's disable that for now so… 

    … we can make progress elsewhere
    @seanmacavaney
    seanmacavaney committed Jul 28, 2024
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  16. splitting out some general java vs terrier stuff

    @seanmacavaney
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  17. forgot to remove bootstrap

    @seanmacavaney
    seanmacavaney committed Jul 28, 2024
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  18. wip

    @seanmacavaney
    seanmacavaney committed Jul 28, 2024
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  19. wip

    @seanmacavaney
    seanmacavaney committed Jul 28, 2024
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  20. import

    @seanmacavaney
    seanmacavaney committed Jul 28, 2024
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  21. imports :(

    @seanmacavaney
    seanmacavaney committed Jul 28, 2024
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  22. weird

    @seanmacavaney
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  23. eps

    @seanmacavaney
    seanmacavaney committed Jul 28, 2024
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  24. wip

    @seanmacavaney
    seanmacavaney committed Jul 28, 2024
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  25. IndexRef was being loaded before the protocol_map was set

    @seanmacavaney
    seanmacavaney committed Jul 28, 2024
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  26. re-enable test_parallel

    @seanmacavaney
    seanmacavaney committed Jul 28, 2024
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  27. refactoring java __init__.py

    @seanmacavaney
    seanmacavaney committed Jul 28, 2024
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  28. more cleanup

    @seanmacavaney
    seanmacavaney committed Jul 28, 2024
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  29. move ApplicationSetup to terrier scope

    @seanmacavaney
    seanmacavaney committed Jul 28, 2024
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  30. cleanup

    @seanmacavaney
    seanmacavaney committed Jul 28, 2024
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Commits on Jul 29, 2024

  1. explanation

    @seanmacavaney
    seanmacavaney committed Jul 29, 2024
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  2. anserini

    @seanmacavaney
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  3. I think pyserini==0.25.0 is a bad build somehow, based on the error m… 

    …essage
    @seanmacavaney
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  4. also disable anserini.java._post_init if not installed

    @seanmacavaney
    seanmacavaney committed Jul 29, 2024
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  5. allow pt.java.required to be used as a function too

    @seanmacavaney
    seanmacavaney committed Jul 29, 2024
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  6. update pt.io for pt.java

    @seanmacavaney
    seanmacavaney committed Jul 29, 2024
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  7. update pt.ltr for pt.java

    @seanmacavaney
    seanmacavaney committed Jul 29, 2024
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  8. update pt.model for pt.java

    @seanmacavaney
    seanmacavaney committed Jul 29, 2024
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  9. Revert "update pt.model for pt.java" 

    This reverts commit bb35f2b.
    @seanmacavaney
    seanmacavaney committed Jul 29, 2024
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  10. Revert "update pt.ltr for pt.java" 

    This reverts commit 85b92cd.
    @seanmacavaney
    seanmacavaney committed Jul 29, 2024
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  11. move rewrite.py and index.py under terrier/ and update for pt.java

    @seanmacavaney
    seanmacavaney committed Jul 29, 2024
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  12. fix tests

    @seanmacavaney
    seanmacavaney committed Jul 29, 2024
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  13. fix more tests

    @seanmacavaney
    seanmacavaney committed Jul 29, 2024
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  14. update text.py for pt.java

    @seanmacavaney
    seanmacavaney committed Jul 29, 2024
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  15. fix more tests

    @seanmacavaney
    seanmacavaney committed Jul 29, 2024
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  16. import cleanup in __init__.py

    @seanmacavaney
    seanmacavaney committed Jul 29, 2024
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  17. fix broken test

    @seanmacavaney
    seanmacavaney committed Jul 29, 2024
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  18. more cleanup

    @seanmacavaney
    seanmacavaney committed Jul 29, 2024
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  19. fix broken test

    @seanmacavaney
    seanmacavaney committed Jul 29, 2024
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  20. fix broken test

    @seanmacavaney
    seanmacavaney committed Jul 29, 2024
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  21. make java configuration object more pythonic

    @seanmacavaney
    seanmacavaney committed Jul 29, 2024
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  22. moved check_version under pt.terrier and deprecated the one in the ma… 

    …in namespace
    @seanmacavaney
    seanmacavaney committed Jul 29, 2024
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  23. deprecation in the main namespace

    @seanmacavaney
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  24. helper_version stuff is sorted in a previous commit

    @seanmacavaney
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  25. more main namespace deprecation

    @seanmacavaney
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  26. doesn't look like we need global properties

    @seanmacavaney
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  27. further cleanup of main namespace

    @seanmacavaney
    seanmacavaney committed Jul 29, 2024
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  28. split out terrier stemmer, tokeniser, and stopwords

    @seanmacavaney
    seanmacavaney committed Jul 29, 2024
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  29. removed autoclasses from index.py

    @seanmacavaney
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  30. added missing pt.java.required in index.py

    @seanmacavaney
    seanmacavaney committed Jul 29, 2024
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Commits on Jul 30, 2024

  1. flake8 extension to check for missing pt.java.required annotations

    @seanmacavaney
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  2. for ease of reading in gh actions

    @seanmacavaney
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  3. warning for the other case too: annotated but doesn't use java

    @seanmacavaney
    seanmacavaney committed Jul 30, 2024
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  4. fixed missing pt.java.required decorator and allow decorators on classes

    @seanmacavaney
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  5. python compatibility

    @seanmacavaney
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  6. the order of decorators is important?

    @seanmacavaney
    seanmacavaney committed Jul 30, 2024
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  7. check for out-of-order pt.java.required

    @seanmacavaney
    seanmacavaney committed Jul 30, 2024
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  8. prf

    @seanmacavaney
    seanmacavaney committed Jul 30, 2024
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  9. refactoring

    @seanmacavaney
    seanmacavaney committed Jul 30, 2024
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  10. avoid greedy java init in tests

    @seanmacavaney
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  11. more deprecation/backcompat

    @seanmacavaney
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  12. no_download support and automatic "offline" mode handling in mavenres… 

    …olver
    @seanmacavaney
    seanmacavaney committed Jul 30, 2024
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  13. alright, one of the last things remaining is this pesky macos test

    @seanmacavaney
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  14. so what's the deal? Is it the python version?

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  15. ok so must be macos-latest?

    @seanmacavaney
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  16. is it an arm issue? also disable other configs to save time

    @seanmacavaney
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  17. this is actually the arm image name for macos-13

    @seanmacavaney
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  18. hmm that didn't work, here's a version on 14 with intel

    @seanmacavaney
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  19. revert for the time being

    @seanmacavaney
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  20. more informative java loaded message

    @seanmacavaney
    seanmacavaney committed Jul 30, 2024
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  21. management of java settings, etc

    @seanmacavaney
    seanmacavaney committed Jul 30, 2024
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  22. disable arm64 again

    @seanmacavaney
    seanmacavaney committed Jul 30, 2024
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Commits on Jul 31, 2024

  1. disallow changing java settings once it's started

    @seanmacavaney
    seanmacavaney committed Jul 31, 2024
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  2. cleaner pre_init/post_init/etc configuration

    @seanmacavaney
    seanmacavaney committed Jul 31, 2024
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  3. missing decorator

    @seanmacavaney
    seanmacavaney committed Jul 31, 2024
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  4. misc fixes

    @seanmacavaney
    seanmacavaney committed Jul 31, 2024
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  5. anserini messages

    @seanmacavaney
    seanmacavaney committed Jul 31, 2024
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  6. reorg pyterrier/java files to make more sense

    @seanmacavaney
    seanmacavaney committed Jul 31, 2024
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  7. organize java files

    @seanmacavaney
    seanmacavaney committed Jul 31, 2024
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  8. remove deprecated calls in tests

    @seanmacavaney
    seanmacavaney committed Jul 31, 2024
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  9. documentation updates

    @seanmacavaney
    seanmacavaney committed Jul 31, 2024
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  10. private modules

    @seanmacavaney
    seanmacavaney committed Jul 31, 2024
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  11. note about what triggered init in java started message

    @seanmacavaney
    seanmacavaney committed Jul 31, 2024
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  12. more concise java started message

    @seanmacavaney
    seanmacavaney committed Jul 31, 2024
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  13. error when no java initializers found 

    (likely an issue with the editable/develop installation)
    @seanmacavaney
    seanmacavaney committed Jul 31, 2024
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  14. avoid the annoying "bootstrap configuration" message

    @seanmacavaney
    seanmacavaney committed Jul 31, 2024
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  15. avoid the annoying "bootstrap configuration" message

    @seanmacavaney
    seanmacavaney committed Jul 31, 2024
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  16. Merge remote-tracking branch 'origin/java' into java

    @seanmacavaney
    seanmacavaney committed Jul 31, 2024
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Commits on Aug 3, 2024

  1. updated documentation about init

    @seanmacavaney
    seanmacavaney committed Aug 3, 2024
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  2. renamed java Java Initializers to better clarify their purpose

    @seanmacavaney
    seanmacavaney committed Aug 3, 2024
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  3. I think I prefer the kwargs style for JavaClasses

    @seanmacavaney
    seanmacavaney committed Aug 3, 2024
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  4. normalize how the extra requirement decorators are done

    @seanmacavaney
    seanmacavaney committed Aug 3, 2024
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  5. whoops

    @seanmacavaney
    seanmacavaney committed Aug 3, 2024
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Commits on Aug 6, 2024

  1. fix comment typos

    @cmacdonald
    cmacdonald authored Aug 6, 2024
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  2. more expressive deprecated warning for pt.init() 

    from java...java_init_warn
    @seanmacavaney
    seanmacavaney committed Aug 6, 2024
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Commits on Aug 7, 2024

  1. add comment to warning

    @cmacdonald
    cmacdonald committed Aug 7, 2024
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  2. move to pt.terrier.Retrieve etc by default

    @cmacdonald
    cmacdonald committed Aug 7, 2024
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  3. update README examples

    @cmacdonald
    cmacdonald committed Aug 7, 2024
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  4. udpate all references to BatchRetrieve in the documentation

    @cmacdonald
    cmacdonald committed Aug 7, 2024
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  5. fix typo comment

    @cmacdonald
    cmacdonald committed Aug 7, 2024
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Commits on Aug 9, 2024

  1. always load prf package

    @seanmacavaney
    seanmacavaney committed Aug 9, 2024
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  2. split out parallel tests into a separate gh action

    @seanmacavaney
    seanmacavaney committed Aug 9, 2024
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Commits on Aug 10, 2024

  1. move retrieve.py back to retriever.py

    @seanmacavaney
    seanmacavaney committed Aug 10, 2024
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  2. Retrieve -> Retriever

    @seanmacavaney
    seanmacavaney committed Aug 10, 2024
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  3. Merge branch 'java' into java_terrier_retrieve

    @seanmacavaney
    seanmacavaney committed Aug 10, 2024
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  4. fix typo

    @seanmacavaney
    seanmacavaney committed Aug 10, 2024
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  5. a bunch of BatchRetrieve -> Retriever (mostly in docs)

    @seanmacavaney
    seanmacavaney committed Aug 10, 2024
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  6. merge error

    @seanmacavaney
    seanmacavaney committed Aug 10, 2024
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  7. Merge pull request #449 from terrier-org/java_terrier_retrieve 

    Use pt.terrier.Retriever instead of pt.BatchRetrieve
    @seanmacavaney
    seanmacavaney authored Aug 10, 2024
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Commits on Aug 13, 2024

  1. Merge commit '4dd0752' into java_backport_453

    @cmacdonald
    cmacdonald committed Aug 13, 2024
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  2. fix warning message to correctly split out pkg defn

    @cmacdonald
    cmacdonald committed Aug 13, 2024
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  3. upgrade for java branch

    @cmacdonald
    cmacdonald committed Aug 13, 2024
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  4. make it easier to take env variables

    @cmacdonald
    cmacdonald committed Aug 13, 2024
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  5. use !r repr for strings

    @cmacdonald
    cmacdonald committed Aug 13, 2024
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  6. Update push.yml

    @seanmacavaney
    seanmacavaney authored Aug 13, 2024
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Commits on Aug 14, 2024

  1. deprecated modifies the class so need stubs for deprecated transformers

    @seanmacavaney
    seanmacavaney committed Aug 14, 2024
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  2. use tiebreak results for RM3

    @cmacdonald
    cmacdonald committed Aug 14, 2024
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  3. reduce digits for term weights to avoid rounding errors on different … 

    …platforms
    @cmacdonald
    cmacdonald committed Aug 14, 2024
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  4. wip - docvectors support in FeaturesRetrieve

    @cmacdonald
    cmacdonald committed Aug 14, 2024
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Commits on Aug 15, 2024

  1. improved test cases

    @cmacdonald
    cmacdonald committed Aug 15, 2024
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  2. configurable DV matching implementation

    @cmacdonald
    cmacdonald committed Aug 15, 2024
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  3. ensure 5.10 is there before tests will run

    @cmacdonald
    cmacdonald committed Aug 15, 2024
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  4. Merge pull request #455 from terrier-org/dv 

    docvectors implementation for Feature retrieval
    @seanmacavaney
    seanmacavaney authored Aug 15, 2024
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Commits on Aug 16, 2024

  1. Revert "Merge pull request #455 from terrier-org/dv" 

    This reverts commit 087c29d, reversing
changes made to 8134536.

We'll make this as a seprate PR to main later
    @seanmacavaney
    seanmacavaney committed Aug 16, 2024
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  2. Merge pull request #454 from terrier-org/java_backport_453 

    Backport #453 to Java branch
    @seanmacavaney
    seanmacavaney authored Aug 16, 2024
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  3. flash before RM3

    @cmacdonald
    cmacdonald committed Aug 16, 2024
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  4. mergeing rm3 tests back into the main rewrite test file

    @seanmacavaney
    seanmacavaney committed Aug 16, 2024
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  5. in a short interim

    @seanmacavaney
    seanmacavaney committed Aug 16, 2024
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  6. add deprecation on (F)BR.from_dataset

    @cmacdonald
    cmacdonald committed Aug 16, 2024
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  7. Merge branch 'java' of github.com:terrier-org/pyterrier into java

    @cmacdonald
    cmacdonald committed Aug 16, 2024
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