From 2ff0067ebf463116bfa22bab23dcad76b783ebcd Mon Sep 17 00:00:00 2001
From: pvannierop <pim@thehyve.nl>
Date: Tue, 24 Oct 2023 13:29:42 +0200
Subject: [PATCH] Add mapper xml logic for genomicProfiles in study view filter

---
 .../persistence/mybatiscolumnstore/StudyViewMapper.xml | 10 ++++++++++
 1 file changed, 10 insertions(+)

diff --git a/persistence/persistence-mybatis/src/main/resources/org/cbioportal/persistence/mybatiscolumnstore/StudyViewMapper.xml b/persistence/persistence-mybatis/src/main/resources/org/cbioportal/persistence/mybatiscolumnstore/StudyViewMapper.xml
index 95f4e844515..73dd1c85b0b 100644
--- a/persistence/persistence-mybatis/src/main/resources/org/cbioportal/persistence/mybatiscolumnstore/StudyViewMapper.xml
+++ b/persistence/persistence-mybatis/src/main/resources/org/cbioportal/persistence/mybatiscolumnstore/StudyViewMapper.xml
@@ -196,6 +196,16 @@
                     </include>
                 </foreach>
             </if>
+            <if test="studyViewFilter.genomicProfiles != null">
+                <foreach item="genomicProfileIds" collection="studyViewFilter.genomicProfiles" open="INTERSECT" separator="INTERSECT">
+                    SELECT sample_unique_id
+                    FROM sample_in_genomic_profile
+                    WHERE genomic_profile_stable_id_short IN
+                    <foreach item="genomicProfileId" collection="genomicProfileIds" open="(" separator="," close=")">
+                        #{genomicProfileId}
+                    </foreach>
+                </foreach>
+            </if>
             <!-- ... extend for other elements of the StudyViewFilter object -->
         </trim>
     </sql>