Skip to content
thinhong edited this page Aug 25, 2020 · 23 revisions

MethPanel consists of 2 main components: Upstream analysis and shinyApp client.

  • Upstream analysis: including indexing, trimming, alignment, DNA methylation calling, DNA methylation pattern calling, polymorphism calling, compiling a table of methylation values for all samples, calculating metrics

  • shinyApp client: interactive visualization of the above elements

Clone this wiki locally