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Contributions from TIQI #1

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@carmelom carmelom commented Nov 7, 2024

Merging the results of some year-long development within the TIQI group, now getting public.

Major changes

  • Codebase
    • Removed Registry classes, restructured Atom class as graph powered by networkx
    • Standardize input data for States and Transitions to include different databases (WIP)
    • Add qutip and a module for hamiltonians
    • Use poetry as build backend
  • Docs
    • Document and reference all formulas (WIP)
    • Example notebooks

mgrau and others added 30 commits October 31, 2021 20:16
@mgrau
change mkdocs to execute notebooks on build
87998ae
@mgrau
change BaseException to Exception
196f8f2
@mgrau
move duplicated logic from StateRegistry and TransitionRegistry into …
a0c4737 
…TypeRegistry
@mgrau
automatically find property.setter methods in Transition.__init__
c6f6b15
@mgrau
make condition to identify configuration as monovalent more restrictive
4938745
@mgrau
fix small bug in State.name
b983287
@mgrau
add test for State.states
d33b71c
@mgrau
add test for State search of TransitionRegistry
91c10e2
@mgrau
add search for State in TransitionRegistry
84b6682
@mgrau
change polarizability calculation to be simpler
c819955
Initial commit
48e9ad7
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wojtekadamczyk3 and others added 23 commits May 1, 2024 13:51
@wojtekadamczyk3
Simplified the Electric Field Class with the non-hierarchal initializ…
ef346bb 
…ation
@wojtekadamczyk3
Add docu to the get functions, and fix linting problems
12e7b0f
@wojtekadamczyk3
Set values in electric-field through setter
97d0622
@wojtekadamczyk3
fixed some bugs
1f6f946
@wojtekadamczyk3
fixed bugs
de0d2aa
change name
21dbbc1
@wojtekadamczyk3
arbitrary magnetic field
1563547
@wojtekadamczyk3
corrected units of Zeeman Hamiltonian
49bd3af
@wojtekadamczyk3
added 2pi to zeeman hamiltonian
db6f946
@wojtekadamczyk3
small changes
48681b4
@wojtekadamczyk3
documentation_changes
21f9f30
@wojtekadamczyk3
updated docs
f8cf3d4
@philipleindecker
Clean up ElectricField and GaussianBeam
f2f49f1
@wojtekadamczyk3
'matrix element'
38303e8
@wojtekadamczyk3
fix w3j bug
6456afe
@wojtekadamczyk3
halfint for w3j symbols
421fa2e
@wojtekadamczyk3
halfint function implementation
3466bfa
@wojtekadamczyk3
halfint to inthalf
bccd580
@wojtekadamczyk3
Documentation of calculations
a05cddb
@wojtekadamczyk3
hamiltonians documentation
cf2d4aa
@wojtekadamczyk3
collapse operators
ba8219e
@wojtekadamczyk3
added examples
a207db9
@carmelom
Merge branch 'structured_develop' into 'main'
ecb852d 
Structured develop

See merge request tiqi-projects/optical-trap/atomphys_tiqi!9
@carmelom carmelom self-assigned this Nov 7, 2024
@carmelom carmelom marked this pull request as draft November 7, 2024 08:28
@carmelom carmelom marked this pull request as ready for review November 7, 2024 08:29
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4 participants
@carmelom @mgrau @wojtekadamczyk3 @philipleindecker