pymolrc

_ feedback push
_ feedback disable,all,everything

#3 button mouse
config_mouse three_button

#Aliases
alias clear, mstop; mclear; hide all
alias nogui, set internal_gui=0
alias gui, set internal_gui=1
alias shiny, set spec_power=250; set spec_refl=1.5; set antialias=1; ray
alias exit, quit
alias white, bg_color white; set depth_cue=0; set ray_trace_fog=0

#default fetch location, so as not to fill the home directory
#set fetch_path, ~/pdbs

#Ray tracing
set ray_opaque_background, false
set ray_shadow, false 

from pymol import cmd
import sys

run ~/dotfiles/pymol_scripts/color_chains.py
run ~/dotfiles/pymol_scripts/find_seq.py
run ~/dotfiles/pymol_scripts/super_all.py
run ~/dotfiles/pymol_scripts/select_mutated.py
run ~/dotfiles/pymol_scripts/display_scripts.py

#run ~/dotfiles/pymol_scripts/color_obj.py
#print "RAN color_obj.py"

#run ~/dotfiles/pymol_scripts/ShowInterface.py
#run /Users/timjacobs/rosetta/python_scripts/pymol_scripts/rosetta_tools.py
#print "Ran rosetta_tools.py"
#run /home/andrew/pymol_scripts/AntibodyInterface.py
#print "RAN sasa_radii.py"
#run /home/andrew/pymol_scripts/sasa_radii.py
#print "about to run ShowDesign.py"
#run /Users/plato/pymol_scripts/ShowDesign.py
#run /home/andrew/pymol_scripts/ShowDesign.py
#print "RAN ShowDesign.py"
#
# END COMMANDS

_ feedback pop