Merge branch 'main' into deployment

tnaccarato · Aug 29, 2024 · eb772ef · eb772ef
2 parents 8933859 + 1ec8fde
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diff --git a/README.md b/README.md
@@ -7,6 +7,10 @@ Docker and Docker Compose on your system.
     - You can access the installation instructions here: [Get Docker](https://docs.docker.com/get-docker/).
 - SSL Certificates (cert.pem and key.pem) for HTTPS configuration.
 - `docker-compose.yml` file from the repository.
+- If using Windows, openSSL is required to generate SSL certificates. Follow this 
+[link](https://slproweb.com/products/Win32OpenSSL.html) and download the latest version of openSSL.
+  - Alternatively, you can use the Windows Subsystem for Linux (WSL) to generate the certificates or use your preferred
+package manager (e.g. [chocolatey](https://github.com/chocolatey/choco)) to install openSSL.
 
 ## Project Directory Structure
 Make sure that your project directory contains the following before starting:

diff --git a/outputs/clusters/SNP_cluster_0.csv b/outputs/clusters/SNP_cluster_0.csv
diff --git a/outputs/clusters/SNP_cluster_1.csv b/outputs/clusters/SNP_cluster_1.csv
diff --git a/outputs/clusters/SNP_cluster_2.csv b/outputs/clusters/SNP_cluster_2.csv
diff --git a/outputs/clusters/SNP_cluster_3.csv b/outputs/clusters/SNP_cluster_3.csv
diff --git a/outputs/clusters/SNP_cluster_4.csv b/outputs/clusters/SNP_cluster_4.csv
diff --git a/outputs/clusters/SNP_cluster_5.csv b/outputs/clusters/SNP_cluster_5.csv
diff --git a/outputs/clusters/SNP_cluster_6.csv b/outputs/clusters/SNP_cluster_6.csv
diff --git a/outputs/clusters/phenotype_cluster_0.csv b/outputs/clusters/phenotype_cluster_0.csv
diff --git a/outputs/clusters/phenotype_cluster_1.csv b/outputs/clusters/phenotype_cluster_1.csv
diff --git a/outputs/clusters/phenotype_cluster_2.csv b/outputs/clusters/phenotype_cluster_2.csv
diff --git a/outputs/clusters/phenotype_cluster_3.csv b/outputs/clusters/phenotype_cluster_3.csv
diff --git a/outputs/clusters/phenotype_cluster_4.csv b/outputs/clusters/phenotype_cluster_4.csv
diff --git a/outputs/grid_search_results_disease.csv b/outputs/grid_search_results_disease.csv
@@ -0,0 +1,163 @@
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