Hardware and software for accessible, extensible, and scalable bioreactors. Built on Raspberry Pi.

An open-source Raspberry-Pi based photobioreactor for cultivating and assessing physiology (photosynthesis & productivity) in microscopic algae.

An open-source Arduino based chlorophyll fluorometer for quantifying photosynthesis in photosynthetic organisms.

A quick and easy way to download the genomes/predicted proteins of taxa available in JGI's Genome Portal.

Git repository for the R package "LOBSTAHS" (Lipid and Oxylipin Biomarker Screening Through Adduct Hierarchy Sequences)

Detection of algal bodies in coral-reef dataset

Control Scripts for Photon Systems Instruments (PSI) Bioreactor Client

a carbonate chemistry model to predict CO2 losses to the atmosphere from algal raceway ponds

A web app to predict algae levels in Bay of Bengal

Resources for how to live permanently in the oceans.

R package for calculating Algal Stream Condition Index (ASCI) scores

Open source XPRIZE carbon removal entry

This repository contains the code to reproduce the environmental life cycle assessment study of a novel pilot scale Spirulina biorefinery. This work was performed in the frame of the Circular Bio-based Europe project "SpiralG" from 2019 to 2022.

Repository of assembled reference genomes of the green model alga Chlamydomonas reinhardtii including files optimised for visualisation in IGV

Lacustrine algae bloom classification with satellite imagery and a neural network.

Contribution of soil algae to the global carbon cycle

A simulation as a proof of concept for automated skimming of algae in mostly still water.

Phage to Shark

A Science & Technology Studies influenced Golf Hole

A jupyter notebook analyzing the ocean temperature and it's relation to algae (2021).