Git repository for the R package "LOBSTAHS" (Lipid and Oxylipin Biomarker Screening Through Adduct Hierarchy Sequences)

Hardware and software for accessible, extensible, and scalable bioreactors. Built on Raspberry Pi.

An open-source Raspberry-Pi based photobioreactor for cultivating and assessing physiology (photosynthesis & productivity) in microscopic algae.

A quick and easy way to download the genomes/predicted proteins of taxa available in JGI's Genome Portal.

R package for calculating Algal Stream Condition Index (ASCI) scores

Exploring agency in biological practice

Control Scripts for Photon Systems Instruments (PSI) Bioreactor Client

An open-source Arduino based chlorophyll fluorometer for quantifying photosynthesis in photosynthetic organisms.

A Science & Technology Studies influenced Golf Hole

a carbonate chemistry model to predict CO2 losses to the atmosphere from algal raceway ponds

Data and R code accompanying a literature review on plants as part of integrated multi-trophic aquaculture (IMTA).

Contribution of soil algae to the global carbon cycle

This repository contains the code to reproduce the environmental life cycle assessment study of a novel pilot scale Spirulina biorefinery. This work was performed in the frame of the Circular Bio-based Europe project "SpiralG" from 2019 to 2022.

Phage to Shark

Repository of assembled reference genomes of the green model alga Chlamydomonas reinhardtii including files optimised for visualisation in IGV

A jupyter notebook analyzing the ocean temperature and it's relation to algae (2021).

Differential gene expression analysis of Nannochloropsis oceanica growth with or without beneficial/harmful bacteria.

An interactive map of algal blooms

Project Blue Green: Sustainable Algae Bioreactor (Under Development)

Lab website, Johns Hopkins University, Betenbaugh Lab