Discover differential transcript usage from polyA-captured single cell RNA-seq data
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Jun 29, 2023 - R
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alternative-polyadenylation
Here are 10 public repositories matching this topic...
Dynamic Analysis of Alternative Polyadenylation from single-cell RNA-seq (scDaPars)
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May 25, 2021 - R
Community effort to evaluate computational methods for the detection and quantification of poly(A) sites and estimating their differential usage across RNA-seq samples
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Jan 11, 2024 - Python
Model-based analysis of APA using 3' end-linked reads
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Aug 14, 2021 - R
This repo stores codes for the analysis of tasrkleat results on TCGA RNA-Seq dataa
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Jan 24, 2019 - Jupyter Notebook
Targeted analysis of alternative polyadenylation of candidate genes with RNA-Seq data
docker rna-seq cloud-computing google-cloud-platform de-novo-assembly alternative-polyadenylation cleavage-sites
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Feb 22, 2019 - Python
Determine polyA sites from 3'end sequence data
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Apr 23, 2017 - Python
3' UTR cleavage site identification from the Mouse Cell Atlas
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Jul 5, 2023 - R
Home to the development of the TREND-DB application
database alternative-splicing data-exploration enrichment-analysis alternative-polyadenylation trendseq rnai-screening
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Oct 25, 2024 - R
Cleavage site prediction via de novo assembly
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Feb 21, 2019 - Python
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