Application and Python module for average nucleotide identity analyses of microbes.
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Updated
Oct 16, 2024 - Python
Application and Python module for average nucleotide identity analyses of microbes.
Rapid determination of appropriate reference genomes.
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PyO3 bindings and Python interface to skani, a method for fast genomic identity calculation using sparse chaining.
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Cython bindings and Python interface to FastANI, a method for fast whole-genome similarity estimation.
Bacterial taxonomy construction and evaluation in R
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Extract icons from .ani RIFF files. Mirror of https://unbewohnte.su:3000/Unbewohnte/anicons
R Code to reproduce results in the Nature Communication paper: Murray, C.S., Gao, Y. & Wu, M. Re-evaluating the evidence for a universal genetic boundary among microbial species. Nat Commun 12, 4059 (2021). https://doi.org/10.1038/s41467-021-24128-2
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