AstroPathJHU / AstroPathPipeline Star 18 Code Issues Pull requests The AstroPath Pipeline was developed to process whole slide multiplex immunofluorescence data from microscope to database at single cell resolution. cancer-imaging-research multispectral-images immunofluorescence cancer-immunotherapy cancer-immunology multiplex-imaging Updated May 31, 2023 Python
jeongu / Cancer-Vaccine-Pipeline Star 6 Code Issues Pull requests Constructing Neoantigen Vaccine Pipeline with pVACtools rna-sequencing whole-exome-sequencing pvac-seq cancer-immunotherapy Updated May 12, 2019 Shell
ikmb / PIA-inference Star 2 Code Issues Pull requests the peptide immune annotator pipeline (PIA-P) a collection of bash and Python scripts used running peptide HLA interaction from a variety of inputs ai deep-learning transformer hla infectious-diseases multimodal-learning multimodal-deep-learning cancer-immunotherapy Updated Sep 20, 2022 Python