xinhe-lab / GSFA Star 19 Code Issues Pull requests R package that performs sparse factor analysis and differential gene expression discovery simultaneously on single-cell CRISPR screening data. single-cell factor-analysis scrna-seq-analysis differential-expression-analysis crispr-screen-analysis Updated Oct 3, 2023 C++
niekwit / crispr-screens Star 4 Code Issues Pull requests Snakemake workflow for CRISPR-Cas9 screen analysis bioinformatics-pipeline snakemake-workflow crispr-screen-analysis Updated Dec 6, 2024 Python
kdelint / IsogenicZ Star 0 Code Issues Pull requests IsogenicZ is an adaptation of the DrugZ software, designed for analysis of parallel isogenic screens crispr-screen-analysis Updated Sep 19, 2023 Python
LRPatel1 / SLIDER Star 0 Code Issues Pull requests SLIDER: Scoring Soriting Screens with Laplace and Differential Rank functional-genomics crispr-screen-analysis fluorescence-activated-cell-sorting Updated Jul 25, 2022 R