CryoREAD: a computational tool using deep learning to automatically build full DNA/RNA atomic structure from cryo-EM map.
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Oct 14, 2024 - Python
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dna-structure
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Python snippets for PyMOL to be run in Jupyterlab via the jupyterlab-snippets-multimenus extension.
python
snippets
jupyter
notebook
pdb
protein-structure
jupyter-notebook
literate-programming
rna-structure
jupyterlab
grayscale
molecular
mmcif
ligand
biomolecular
molecular-representation
ribbon-diagram
dna-structure
moleclar-graphics
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May 9, 2024 - HTML
PyMOL snippet library is written in Python for use in RStudio via the R reticulate package and the PyMOL Python API.
pdb
rstudio
protein-structure
rmarkdown
molecular-graphics
pymol
literate-programming
rna-structure
r-programming
reticulate
molecular-structure
molecular-visualization
molecular-artwork
pymolpysnips
dna-structure
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May 15, 2024 - Vim Snippet
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Jun 21, 2023 - Jupyter Notebook
Analysis of RoseTTAFold2NA structure predictions to understand whether it can be used to determine the spacing and/or orientation preferences of transcription factors
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Jun 30, 2024 - Python
Analysis of G-Quadruplexes across the tree of life
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Oct 17, 2024 - Jupyter Notebook
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