A tool for visualizing ABC enhancer-gene connections in the context of genetic variants.
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May 3, 2023 - TypeScript
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enhancers
Here are 8 public repositories matching this topic...
Analyses for "Diverse logics and grammar encode notochord enhancers" study to be featured in Cell Reports
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Nov 24, 2022 - HTML
Code repository for the research paper "Characterising intergenic transcription at RNA polymerase II binding sites in normal and cancer tissues" by Pierre de Langen et al.
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Jun 29, 2023 - Python
Machine learning models of conserved regulatory elements and human genetics of neuropsychiatric traits
genomics
evolution
epigenetics
comparative-genomics
enhancers
human-genetics
neuropsychiatric-disorders
substance-use-disorder
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Feb 10, 2023 - Jupyter Notebook
CocoTF: a workflow to identify context specific co-occurring TF motifs using bedtools, Homer and R packages.
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Jun 2, 2023 - Shell
Files used to generate Michelle Franc Ragsac's Ph.D. Dissertation
bioinformatics
phd-thesis
phd-dissertation
developmental-biology
functional-genomics
enhancers
notochord
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Oct 24, 2023 - TeX
Workflow to identify functional cis-regulatory regions for each annotated cell type
deep-learning
hi-c
promoters
enhancers
single-cell-rna-seq
single-cell-atac-seq
cross-species
shap
single-cell-methylation
single-cell-multiomics
cis-regulatory-elements
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Apr 17, 2024 - Python
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