Reusable and maintained Luigi tasks to incorporate in bioinformatics pipelines
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Aug 19, 2024 - Python
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ensembl-vep
Here are 4 public repositories matching this topic...
A Haskell script that performs basic parsing on the default output of ensembl-vep and variant-calling format (vcf) files.
haskell
parsing
composable
vcf-converter
variant-call-format
variant-effect-prediction
ensembl-vep
unix-tool
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Sep 23, 2020 - Haskell
VEP environments containerized for singularity
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Aug 23, 2018 - Shell
This repo contains the code to dockerize a ensembl REST server on your own local machine. It allows the user to specify a different configuration to a locally hosted ensembl database and tweeking of the throtelling settings setup by default by ensembl for their own servers
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May 12, 2023 - Dockerfile
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