Legacy, see cancerit/PCAP-core: NGS reference implementations and helper code for the IGCG/TCGA Pan-Cancer Analysis Project
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Updated
Jun 12, 2024 - Perl
Legacy, see cancerit/PCAP-core: NGS reference implementations and helper code for the IGCG/TCGA Pan-Cancer Analysis Project
📦 An R package for accessing genomics data from UCSC Xena platform, from cancer multi-omics to single-cell RNA-seq https://cran.r-project.org/web/packages/UCSCXenaTools/
CG - cancer genomics pipeline
A JBrowse plugin for viewing ICGC Data
A Nextflow pipeline to run featureCounts on RNAseq BAM files on ICGC in AWS/AWS Batch
Foc al Bosc: Visor incendis forestals Catalunya 1986-2017
Re-usable React Components for ICGC-ARGO sites
Various utility scripts and ICGC DCC data specification templates / conversion tools written during early development work on the current ICGC DCC data portal (2.0)
icgc storage client file provisioning plugin
Documentació i exemples de l'API Territorial de l'ICGC
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