Open Source Ion Mobility Spectrometer

A workflow for metabolite identification and accurate profiling in multidimensional LC-IM-MS-DIA measurements. DOI: 10.5281/zenodo.

An open-source prediction framework for peptide ion collision cross section (CCS) values with python.

prototype machine-learning solutions for high-throughput MS with ease

Software to convert multidimensional MS data from files in proprietary vendor formats to HDF5 format in the simple MZA data structure.

A Framework for IMS-MS Raw Data Processing written in Rust and Python.

Beta-DIA is a partially open-source, free-to-use Python software that provides comprehensive peptide/protein identification and accurate quantification results for single-shot diaPASEF data.

Python and R scripts with examples demonstrating the conversion of IM-MS raw data to CCS/z space.

A simple GUI tool for comparing two CIU datasets

A user-friendly application for precise conformation sampling

Gas phase molecular charge state predictor

Origami analyst is a Framework tool, which provides predictive structural data on a protein based off Mass Spectrometry and Ion mobility data provided by the user. It is still a work in progress and my first project to upload to github.

An application for peptide sequencing of ion mobility mass spectrometry data

A software tool for omics-agnostic automated quality control of mass spectrometry data.