metanetx

Here are 5 public repositories matching this topic...

naive index and query scripts for free reference bioinformatics datasets

pubmed hgnc uniprot hmdb metanetx

Parse and process information from MetaNetX for MIRIAM compatibility using the Identifiers.org registries.

bioinformatics sdk identifiers-org miriam metanetx

Transform MetaNetX components information and load them into SQL storage.

bioinformatics sql metanetx metanetx-assets

A Docker image that contains a conda environment with all of the mnx command line tools installed.

docker conda metanetx metanetx-sdk metanetx-assets metanetx-post

A Nextflow pipeline for extracting, transforming, augmenting, and loading the MetaNetX contents into a SQL database.

nextflow nextflow-pipeline metanetx

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