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metapopulation

Here are 14 public repositories matching this topic...

iafelipe / pysagem

Simulate and visualize biological invasions in dynamic landscapes

python computational-biology metapopulation ecology ecology-modelling biological-invasions

Updated Sep 1, 2024
Python

sghosh89 / WP3_SpatialSyn

Spatial synchrony at the extremes

timeseries birds trait metapopulation copula phylogeny abundance spatial-synchrony lter dispersal climate-extremes tail-dependent-synchrony

Updated May 12, 2024
R

FranzValerio / Stochastic-epidemic-control

En este repositorio pueden encontrarse los códigos utilizados para realizar el trabajo de tesis de maestría.

metapopulation epidemiology stochastic-control hamilton-jacobi-bellman epidemic-simulations physics-informed-neural-networks

Updated Jul 8, 2023
Jupyter Notebook

phononautomata / madrid

Code for SIR metapopulation model with perimeter lockdowns for Madrid, Spain

python metapopulation epidemics lockdown sir-model

Updated Feb 1, 2023
Python

MetaLandSim

FMestre1 / MetaLandSim

Metapopulations Persistence and Range Expansion Simulation

metapopulation species ecology biogeography

Updated Jan 12, 2023
AGS Script

pitmonticone / EpiSimulator

EpiSimulator: A Data-Driven Stochastic Hybrid Model for COVID-19 in Italy.

social-network network-science metapopulation graph-theory temporal-networks applied-mathematics agent-based-modeling dynamical-systems differential-equations stochastic-processes mathematical-physics agent-based-simulation behavioral-modelling contact-networks computational-epidemiology digital-epidemiology mathematical-epidemiology mobility-networks network-epidemiology epidemic-modelling

Updated Dec 25, 2022
Jupyter Notebook

RiegelGestr / multiplex_mobility_italy_municipalities

Multiplex Mobility Italy at municipality level and SIR Metapopulation simulation

python network julia scraping julia-language metapopulation disease epidemics mobility

Updated Sep 5, 2022
Julia

RowanDurrant / DFTD

Individual-based metapopulation model of devil facial tumour disease.

metapopulation individual-based-modelling dftd

Updated Dec 13, 2021
R

sghosh89 / ERC

This repo is the complete workflow for this publication: Tail associations in ecological variables and their impact on extinction risk, Ghosh et al., Ecosphere 11(5):e03132. For details and citation see here:

metapopulation copula extinction-risk-assessment population-model age-structured-model extreme-events tail-association

Updated Apr 27, 2020
R

ezylstra / Zylstra_etal_2019_EcoApps

Zylstra, E. R., D. E. Swann, B. R. Hossack, E. Muths, and R. J. Steidl. 2019. Drought-mediated extinction of an arid-land amphibian: insights from a spatially explicit dynamic occupancy model. Ecological Applications 29:e01859

metapopulation extinction occupancy colonization amphibian leopard-frog

Updated Dec 21, 2019
R

rbslandau / Patchmodel

Repo for publication on metapopulation model

r metapopulation modelling

Updated Jan 15, 2019
R

GieziJo / mountain_metapopulation

This repo contains a slimed down implementation of the code used in "A minimalist model of extinction and range dynamics of virtual mountain species driven by warming temperatures" by Giezendanner et al. (2019) to be used in ECOPOTENTIALs VLab.

metapopulation spom

Updated Nov 13, 2018
Python

timcdlucas / Abundance-Density-Manuscript

Repository for "Role of inter-related population-level host traits in determining pathogen richness and zoonotic risk" by lucas et al.

network metapopulation bats epidemiology zoonotic-disease pathogen-richness

Updated Aug 2, 2017
TeX

timcdlucas / MetapopEpi

Package for running metapopulation simulations

competition metapopulation networks epidemiology multipathogen

Updated Jan 20, 2017
R

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