Identify and quantify MHC eluted peptides from mass spectrometry raw data

Fork of the Polysolver project

R package – HLA Genotype Imputation with Attribute Bagging (development version only)

Tool for Motif Deconvolution in large HLA-II ligand datasets without the need of prior alignment.

DNA and RNA variant calling pipelines with HLA typing and Neoantigen predictions

Incredible Deep Learning in immunooncology with Pytorch - workshop at AIRR Community Meeting IV

Metahash API client

Mining TCR:pMHC structural data

Standardise TR/MH data

A tool for downloading HLA alleles, epitopes and frequencies

Dataset of 86.000 peptides and their binding degree, that can be used to predict, whether a peptide is binded or not.

A utility for splitting mixed origin NGS reads with secondary or alt mappings

Publicly available Base5 Genomics MHC haplotigs.

Metahash API client

GPU-based implementation for the HLA genotype imputation method (HIBAG)

Home of https://www.mhc.zone

Phenome-wide association study of the major histocompatibility complex region in the Korean population identifies novel association signals

Adversarial autoencoders for MHCI epitope and immunogenicity prediction