An attempt to help anyone interested in using Perl for Bioinformatics

RNAcentral website source code

Rfam documentation and help hosted on ReadTheDocs

Rfam production pipeline

Rfam website source code

BiLSTM-Attention Transformer for non-coding RNA Coding Potential Prediction（Code）Journal of Chemical Information and Modeling 2024-08-09 | Journal article DOI: 10.1021/acs.jcim.4c01097

A tool for tRNA-derived small RNA annotation

Learn how to annotate a genome with Rfam families using Infernal

Backend for the Rfam family building pipeline

ncRNABert: Deciphering the landscape of non-coding RNA using language model

ncRNA identification, annotation and functional prediction

Codes for the paper entitled: Non-Coding RNAs Improve the Predictive Power of Network Medicine

Source code for "Overexpression of CRNDE in glioblastoma is a poor survival prognosis biomarker" paper

Inferring ncRNA synergistic competition

Code for importing ZWD into RNAcentral

MD thesis' project, where I performed an In silico target prediction for small ncRNAs in Mycobacterium tuberculosis

ML based tool for discovering of coding and non coding small RNAs in human RNA-seq data