A collection of unexpected challenges and learnings with nextflow and nf-core.
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Updated
Oct 17, 2023 - Shell
A collection of unexpected challenges and learnings with nextflow and nf-core.
Working through NextFlow tutorials. See https://github.com/nextflow-io/training
A template for nextflow-hub process
Nextflow wrapper for spotyping
Nextflow wrapper for tb-profiler
Nextflow wrapper for fastqc
Nextflow wrapper for mykrobe
Nextflow wrapper for kvarq
Nextflow wrapper for snippy
Nextflow wrapper for quast
Nextflow wrapper for spades
Nextflow wrapper for trimmomatic
Nextflow wrapper for gunzip
Nextflow wrapper for prokka
Nextflow wrapper for rd-analyzer
Nextflow wrapper for multiqc
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