Nextflow pipeline for plasmodium SNP calling
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Updated
Oct 31, 2024 - Nextflow
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posseleff-paper
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Nextflow pipeline for analyzing empirical WGS data for the effect of positive selection on IBD-based inference
metadata
imputation
population-structure
deconvolution
whole-genome-sequencing
infomap
plasmodium-falciparum
multiple-infection
empirical-data
ibd-inference
effective-population-size
posseleff-paper
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Updated
Feb 16, 2024 - Nextflow
Nextflow pipeline to assess the impact of positive selection on Identity by Descent (IBD)-based inferences, utilizing population genetic simulations and true IBD inferences.
population-structure
positive-selection
identity-by-descent
nextflow-pipeline
effective-population-size
posseleff-paper
true-ibd
ibd-based-inferences
population-genetic-simulations
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Updated
Feb 15, 2024 - Python
Calculate IBD segments from tree sequence using tskit C API
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Updated
Jul 12, 2024 - C++
A python package to facilitate identity-by-descent-based analysis
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Updated
Jul 3, 2024 - Python
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