ld-tools: toolkit for linkage disequilibrium calculation designed to work locally
Annotation pipeline for HPDS
Small program to mask positions that are likely to result in PMD artifact from a BAM file using a predefined SNP catalog
Progetto di Elementi di Bioinformatica, A.A. 2021/2022
Pysam module (python2.7) singularity container
Investigating unmapped reads within next generation sequencing data will provide additional information regarding the source of the trace microbial reads.
vue app with flask REST api to process genomic data
Bioinformatics CLI tool to generate WIG tracks from SAM/BAM files
Per-position and summary statistics for BAM files
Tools to discover natural selection given multiple evolved DNA sequences (e.g., gnomad cohort, or multiple tumor samples)
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