A DSL for data-driven computational pipelines

server for storage and management of singularity images

Container tools for scientific computing! Docs at https://singularityhub.github.io/singularityhub-docs

command line tool for working with singularity hub and singularity containers

example singularity definition files and demos

CoMorMent-Containers

Intel HPC Containers using Singularity

The main platform for sharing all the information about AI/HPC-related containers at C3SE. See also the included tutorial to get started.

The Scientific Filesystem Specification and Documentation

This is a demo about how to develop and deploy a pipeline using nextflow, scif, a container (Singularity and Docker) and its posterior deployment.

singularity container tools for continuous integration and quality assessment

This repo holds the containers for HPC applications used and deployed by CDAC SSDG. It is a single point of contact for the container related issues or support required

Various Singularity recipes I've used to generate containers

Getting Started with Containers on HPC

Optimize workflow for binning metagenomic short reads from multiple samples

Scripts and notes for singularity containers used for bioinformatics analyses

Modular application recipes for the Scientific Filesystem (SCIF)

Singularity containers for Cylc

web application to serve (simple) singularity images

A bioinformatics pipeline that automates the Sanger amplicon sequencing data analysis of thousands of samples in parallel.