smith-waterman
Here are 91 public repositories matching this topic...
Bellman Equation, Needleman-Warsh, Smith-Waterman Algorithms test and written in Ruby
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Dec 18, 2015 - Ruby
C/C++ implementation of the Smith-Waterman algorithm by using SIMD operations (e.g SSE4.1)
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Nov 27, 2016 - C
Showcase of parallelization technologies using sequence alignment algorithms
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Jan 31, 2017 - C++
A simple application to calculate similarity between two files (text document) using Smith-Waterman algorithm that is used originally to determine similar region between two sequences of DNA
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Apr 15, 2017 - Go
Match movie titles with a set of reviews data and perform sentiment analysis
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May 3, 2017 - Java
El presente trabajo muestra la aplicación de algoritmos de alineación de secuencias conocidos como needleman-wunsch (global), smith-waterman (local) y semi-global con sus variantes (kband o afín de costo por gap).
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May 16, 2017 - Python
Examples for SDAccel 2017.1+ on AWS F1 instances
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Jul 24, 2017 - C++
Dynamic Programming in Erlang.
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Aug 10, 2017 - Erlang
GPU-based DNA sequence alignment program using Smith-Waterman
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Aug 31, 2017 - Cuda
Expanded version of the traditional Smith Waterman algorithm for local alignment
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Sep 12, 2017 - Python
A simple parallel implementation of Smith Waterman sequence alignment algorithm.
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Oct 24, 2017 - C++
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Dec 20, 2017 - Python
Implementation of K-means that categorizes sequences into groups based on similarity score derived from Smith-Waterman algorithm.
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May 4, 2018 - Python
Machine learning algorithms for Computational Biology
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May 7, 2018 - C#
Lectures and exercises for Genome Informatics course held on Faculty of Electrical Engineering, University of Belgrade
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Jul 3, 2018 - Jupyter Notebook
Text Similarity Analysis, POS tagging, Hidden markov models, Dependency parser
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Aug 7, 2018 - Python
Lots of protein
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Aug 24, 2018 - Python
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Oct 18, 2018 - C++
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