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Update develop to have new changes #171

Merged
merged 3 commits into from
Nov 14, 2023
Merged

Update develop to have new changes #171

merged 3 commits into from
Nov 14, 2023

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fontikar
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For APC taxa, the scientific_name_id was the scientific_name_id  for the aligned name, not the accepted_name. This was because scientific_name_id  was merged in too early - it has been fixed.
* map in APNI genera

We'd initially made the decision that the genus-column would remain blank if the genus wasn't APC-accepted. For AusTraits at least this is odd - as there are 100's of entries with a taxon name, scientific name, scientific name identifier, but no genus.
Fix how a "genus" is identified within a taxon name

- For hybrid genera the genus name is "x genus" - this was causing problems in AusTraits, because I'd only included an ifelse to hunt for "x" in some places

- As part of this fix, package `extract_genus` into its own function
@fontikar fontikar merged commit ba57e49 into develop Nov 14, 2023
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