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refactor: change from os to pathlib #173

refactor: change from os to pathlib

refactor: change from os to pathlib #173

# This workflow will install Python dependencies, run tests and lint with a variety of Python versions
# For more information see: https://help.github.com/actions/language-and-framework-guides/using-python-with-github-actions
name: Python on pull request
on:
pull_request:
jobs:
build:
runs-on: ${{ matrix.os }}
strategy:
matrix:
os: [ubuntu-latest, macos-latest]
python-version: [3.8]
env:
OS: ${{ matrix.os }}
PYTHON: ${{ matrix.python-version }}
defaults:
run:
shell: bash -l {0}
steps:
- uses: actions/checkout@v4
- name: Set up mamba ${{ matrix.python-version }}
uses: mamba-org/setup-micromamba@v1
with:
micromamba-version: 'latest'
environment-file: environment.yml
init-shell: bash
environment-name: icesat2_toolkit
cache-environment: true
post-cleanup: 'all'
create-args: >-
python=${{ matrix.python-version }}
flake8
pytest
pytest-cov
cython
- name: Lint with flake8
run: |
# stop the build if there are Python syntax errors or undefined names
flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics
# exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide
flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics
- name: Test with pytest
run: |
pip install --no-deps .
pytest --username=${{ secrets.EARTHDATA_USERNAME }} \
--password=${{ secrets.EARTHDATA_PASSWORD }}