make-pdf.sh

# source this file with "." in a shell

# note this script assumes the following paths/versions: python3.7 , /Users/thuerey/Library/Python/3.7/bin/jupyter-book
# updated for nMBA !

# do clean git checkout for changes from json-cleanup-for-pdf.py via:
# git checkout diffphys-code-burgers.ipynb diffphys-code-ns.ipynb diffphys-code-sol.ipynb physicalloss-code.ipynb bayesian-code.ipynb supervised-airfoils.ipynb reinflearn-code.ipynb physgrad-code.ipynb physgrad-comparison.ipynb physgrad-hig-code.ipynb

echo
echo WARNING - still requires one manual quit of first pdf/latex pass, use shift-x to quit
echo

PYT=python3

# warning - modifies notebooks!
${PYT} json-cleanup-for-pdf.py

# clean / remove _build dir ?

/Users/thuerey/Library/Python/3.9/bin/jupyter-book build . 
xelatex book

exit # sufficient for newer jupyter book versions






# old "pre" GEN
#/Users/thuerey/Library/Python/3.7/bin/jupyter-book build . --builder pdflatex
#/Users/thuerey/Library/Python/3.9/bin/jupyter-book build . --builder pdflatex

# old cleanup

cd _build/latex
#mv book.pdf book-xetex.pdf # not necessary, failed anyway
# this generates book.tex

rm -f book-in.tex sphinxmessages-in.sty book-in.aux book-in.toc
# rename book.tex -> book-in.tex  (this is the original output!)
mv book.tex book-in.tex
mv sphinxmessages.sty sphinxmessages-in.sty
mv book.aux book-in.aux
mv book.toc book-in.toc
#mv sphinxmanual.cls sphinxmanual-in.cls

${PYT} ../../fixup-latex.py
# reads book-in.tex -> writes book-in2.tex

# remove unicode chars via unix iconv
# reads book-in2.tex -> writes book.tex
iconv -c -f utf-8 -t ascii book-in2.tex > book.tex

# finally run pdflatex, now it should work:
# pdflatex -recorder book
pdflatex book
pdflatex book

# for convenience, archive results in main dir
mv book.pdf ../../pbfl-book-pdflatex.pdf
tar czvf ../../pbdl-latex-for-arxiv.tar.gz *
cd ../..
ls -l ./pbfl-book-pdflatex.pdf ./pbdl-latex-for-arxiv.tar.gz