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DNA sequences #2

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diegocastano123 opened this issue May 31, 2021 · 3 comments
Open

DNA sequences #2

diegocastano123 opened this issue May 31, 2021 · 3 comments

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@diegocastano123
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diegocastano123 commented May 31, 2021

I have a fasta file with DNA sequences i.e (A, T, G, C) and when run Ufold doesnt work, why?
My fasta file must be aligned?

@sperfu
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sperfu commented Jun 1, 2021

Hi there,

Since our model is designed for predicting RNA sequences whose nucleotides are A,U,C,G (instead of A,T,C,G), so you may need to change your sequence to that accordingly.

Thanks

@diegocastano123
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Hi,

Please check the web server, because in spite of changing of T by U in my fasta sequences, Ufold doesn't want to work correctly. The results of my output are the same as my input.

Best,

@sperfu
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sperfu commented Dec 7, 2021

Hi,

We have updated our web server, that should be work fine right now. Please take a look.

Thanks,

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