add workflows and adapt pyproj for pre-commit #3
Workflow file for this run
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| name: upstream-dev CI | |
| on: | |
| push: | |
| branches: [main] | |
| pull_request: | |
| branches: [main] | |
| schedule: | |
| - cron: "0 18 * * 0" # Weekly "On Sundays at 18:00" UTC | |
| workflow_dispatch: | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ github.ref }} | |
| cancel-in-progress: true | |
| jobs: | |
| detect-test-upstream-trigger: | |
| name: "Detect CI Trigger: [test-upstream]" | |
| if: github.event_name == 'push' || github.event_name == 'pull_request' | |
| runs-on: ubuntu-latest | |
| outputs: | |
| triggered: ${{ steps.detect-trigger.outputs.trigger-found }} | |
| steps: | |
| - uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 2 | |
| - uses: xarray-contrib/ci-trigger@v1.2 | |
| id: detect-trigger | |
| with: | |
| keyword: "[test-upstream]" | |
| upstream-dev: | |
| name: upstream-dev | |
| runs-on: ubuntu-latest | |
| needs: detect-test-upstream-trigger | |
| if: | | |
| always() | |
| && github.repository == 'umr-lops/xarray-safe-s1' | |
| && ( | |
| github.event_name == 'schedule' | |
| || github.event_name == 'workflow_dispatch' | |
| || needs.detect-test-upstream-trigger.outputs.triggered == 'true' | |
| || contains(github.event.pull_request.labels.*.name, 'run-upstream') | |
| ) | |
| defaults: | |
| run: | |
| shell: bash -l {0} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| python-version: ["3.12"] | |
| steps: | |
| - name: checkout the repository | |
| uses: actions/checkout@v4 | |
| with: | |
| # need to fetch all tags to get a correct version | |
| fetch-depth: 0 # fetch all branches and tags | |
| - name: set up conda environment | |
| uses: mamba-org/setup-micromamba@v1 | |
| with: | |
| environment-file: ci/requirements/environment.yaml | |
| environment-name: tests | |
| create-args: >- | |
| python=${{ matrix.python-version }} | |
| pytest-reportlog | |
| - name: install upstream-dev dependencies | |
| run: bash ci/install-upstream-dev.sh | |
| - name: install the package | |
| run: python -m pip install --no-deps -e . | |
| - name: show versions | |
| run: python -m pip list | |
| - name: import | |
| run: | | |
| python -c 'import safe_s1' | |
| - name: run tests | |
| if: success() | |
| id: status | |
| run: | | |
| python -m pytest -rf --report-log=pytest-log.jsonl | |
| - name: report failures | |
| if: | | |
| failure() | |
| && steps.tests.outcome == 'failure' | |
| && github.event_name == 'schedule' | |
| uses: xarray-contrib/issue-from-pytest-log@v1 | |
| with: | |
| log-path: pytest-log.jsonl |