Fix pythonpackage.yml failing on macos-13 #4611
Workflow file for this run
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| name: Python package | |
| on: | |
| push: | |
| branches: | |
| - master | |
| pull_request: | |
| schedule: | |
| - cron: "0 2 * * 1-5" | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ github.ref || github.run_id }} | |
| cancel-in-progress: ${{ github.event_name == 'pull_request' }} | |
| defaults: | |
| run: | |
| shell: bash | |
| jobs: | |
| main: | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: [ubuntu-latest, windows-latest, macos-14] | |
| python-version: ["3.8", "3.9", "3.10", "3.11", "3.12"] | |
| exclude: | |
| - {os: windows-latest, python-version: "3.8"} | |
| steps: | |
| - uses: actions/checkout@v2 | |
| with: | |
| submodules: true | |
| - uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - run: python -m pip install --upgrade pip setuptools wheel uv | |
| # - uses: actions/checkout@v2 | |
| # if: ${{ (github.event.pull_request.head.repo.full_name == 'vaexio/vaex') && (matrix.os == 'ubuntu-latest') }} | |
| # with: | |
| # repository: vaexio/vaex-enterprise | |
| # token: ${{ secrets.PAT_PULL_ENTERPRISE }} | |
| # path: vaex-enterprise | |
| - name: Setup Graphviz | |
| uses: ts-graphviz/setup-graphviz@v2 | |
| - name: Setup PCRE (Nix-only) | |
| if: matrix.os != 'windows-latest' | |
| run: sudo -E bash bin/install_pcre.sh | |
| - name: Install OpenMP runtime (Mac-only) | |
| if: startswith(matrix.os, 'macos') | |
| run: brew install libomp | |
| # xcode 15.2 throws compilation errors ref https://github.com/vaexio/vaex/pull/2432 | |
| # select older xcode from the available versions on the runner ref https://github.com/actions/runner-images/blob/ff9acc6/images/macos/macos-13-Readme.md#xcode | |
| - name: Switch to older Xcode (Mac-only) | |
| if: startswith(matrix.os, 'macos') | |
| run: sudo xcode-select -s "/Applications/Xcode_15.0.1.app" | |
| - name: Copy dll (Windows-only) | |
| if: (matrix.os == 'windows-latest') | |
| uses: ./ci/actions/windll | |
| - name: Install vaex | |
| run: uv pip install -v --system .[ci] | |
| - run: uv pip freeze | |
| # - name: Install vaex-enterprise | |
| # if: ${{ (github.event.pull_request.head.repo.full_name == 'vaexio/vaex') && (matrix.os == 'ubuntu-latest') }} | |
| # run: | | |
| # cd vaex-enterprise | |
| # micromamba install -c conda-forge distributed | |
| # pip install ray | |
| # pip install -e . | |
| # - name: Lint with flake8 | |
| # run: | | |
| # echo "soon" | |
| # # pip install flake8 | |
| # # stop the build if there are Python syntax errors or undefined names | |
| # # flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics | |
| # # exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide | |
| # # flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics | |
| - name: Test with pytest | |
| run: | | |
| ./ci/04-run-test-suite.sh | |
| - name: Test with pytest (with cache on) | |
| if: matrix.python-version == '3.12' && matrix.os == 'ubuntu-latest' | |
| run: | | |
| VAEX_CACHE_RESULTS=1 ./ci/04-run-test-suite.sh | |
| - name: Check ml spec | |
| run: | | |
| python -m vaex.ml.spec packages/vaex-ml/vaex/ml/spec_new.json | |
| diff packages/vaex-ml/vaex/ml/spec_new.json packages/vaex-ml/vaex/ml/spec.json | |
| # - name: Test with pytest (vaex-enterprise) | |
| # if: ${{ (github.event.pull_request.head.repo.full_name == 'vaexio/vaex') && (matrix.os == 'ubuntu-latest') }} | |
| # run: | | |
| # py.test vaex-enterprise/tests --timeout=1000 | |
| - name: Test notebooks | |
| if: matrix.os != 'windows-latest' | |
| run: ./ci/05-run-notebooks.sh | |
| - name: Authenticate Google Cloud Platform | |
| if: ${{ (github.event.pull_request.head.repo.full_name == 'vaexio/vaex') && !((matrix.os == 'windows-latest')) }} | |
| uses: google-github-actions/setup-gcloud@v0 | |
| with: | |
| project_id: ${{ secrets.GCP_PROJECT_ID_VAEX }} | |
| service_account_key: ${{ secrets.GCP_SA_KEY_VAEX }} | |
| export_default_credentials: true | |
| - name: Test vaex-contrib | |
| # do not run in a PR from someone else, skip windows | |
| if: ${{ (github.event.pull_request.head.repo.full_name == 'vaexio/vaex') && (matrix.os != 'windows-latest') }} | |
| env: | |
| PROJECT_ID: ${{ secrets.GCP_PROJECT_ID_VAEX }} | |
| run: ./ci/06-run-contrib-tests.sh | |
| - name: Test comand line | |
| run: | | |
| vaex convert ~/.vaex/data/helmi-dezeeuw-2000-FeH-v2-10percent.hdf5 test.parquet | |
| VAEX_PROGRESS_TYPE=rich vaex convert ~/.vaex/data/helmi-dezeeuw-2000-FeH-v2-10percent.hdf5 test.parquet | |
| vaex settings yaml | |
| vaex settings md | |
| - name: Test server | |
| if: matrix.os != 'windows-latest' | |
| run: | | |
| vaex server --add-example --port 9999 & | |
| - name: Wait for Vaex server | |
| if: matrix.os != 'windows-latest' | |
| uses: ifaxity/wait-on-action@v1 | |
| with: | |
| resource: http-get://localhost:9999/hello | |
| timeout: 5000 | |
| - name: Use the Vaex server | |
| if: matrix.os != 'windows-latest' | |
| run: | | |
| python -c "import vaex; df = vaex.open('ws://localhost:9999/example'); df.x.sum()" | |
| curl -i http://localhost:9999/histogram/example/x |