doc.md

The PLUMED manual

Here you can find the user manuals for currently supported and old versions of PLUMED, along with a manual of the PLUMED GitHub master branch (development version).

Documentation for recent releases {% for item in site.data.releases.current %}{% assign ver=item | split: '.'%}{% assign vers=ver[0] |append: '.' |append: ver[1]%}* [v{{ vers }}.x](http://plumed.github.io/doc-v{{ vers }}/user-doc/html/index.html) {% endfor %}

Documentation for development version

• Development version

Documentation for previous, unsupported releases {% for item in site.data.releases.old %}{% assign ver=item | split: '.'%}{% assign vers=ver[0] |append: '.' |append: ver[1]%}* [v{{ vers }}.x](http://plumed.github.io/doc-v{{ vers }}/user-doc/html/index.html) {% endfor %}* v1.3 (pdf manual)

Further reading

Here you can find a list of papers containing practical PLUMED tutorials:

• Bussi, G. and Tribello, G. A. (2019) Analyzing and biasing simulations with PLUMED

• Barducci A., Pfaendtner J., Bonomi M. (2015) Tackling Sampling Challenges in Biomolecular Simulations. In: Kukol A. (eds) Molecular Modeling of Proteins. Methods in Molecular Biology (Methods and Protocols), vol 1215. Humana Press, New York, NY

• Bussi, G. and Branduardi, D. (2015). Free‐Energy Calculations with Metadynamics: Theory and Practice. In Reviews in Computational Chemistry Volume 28 (eds A. L. Parrill and K. B. Lipkowitz)