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vaquerizaslab

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  1. fanc fanc Public

    FAN-C: Framework for the ANalysis of C-like data

    Python 108 14

  2. tadtool tadtool Public

    TADtool is an interactive tool for the identification of meaningful parameters in TAD-calling algorithms for Hi-C data.

    Python 44 13

  3. chess chess Public

    Comparison of Hi-C Experiments using Structural Similarity.

    Python 26 6

  4. Chang_et_al_Zebrafish_TEs Chang_et_al_Zebrafish_TEs Public

    Jupyter Notebook 10 4

  5. Ing-Simmons_et_al_dorsoventral_3D_genome Ing-Simmons_et_al_dorsoventral_3D_genome Public

    Python 6 4

  6. Hug-et-al-Cell-2017-Supp-Site Hug-et-al-Cell-2017-Supp-Site Public

    Supplementary site for Hug CB, Grimaldi AG, Kruse K, Vaquerizas JM. (2017).

    3

Repositories

Showing 10 of 10 repositories
  • fanc Public

    FAN-C: Framework for the ANalysis of C-like data

    vaquerizaslab/fanc’s past year of commit activity
    Python 108 GPL-3.0 14 99 1 Updated Mar 13, 2024
  • chess-2021 Public
    vaquerizaslab/chess-2021’s past year of commit activity
    HTML 3 MIT 0 0 0 Updated Oct 25, 2023
  • chess Public

    Comparison of Hi-C Experiments using Structural Similarity.

    vaquerizaslab/chess’s past year of commit activity
    Python 26 6 19 (1 issue needs help) 0 Updated Jul 18, 2023
  • tadtool Public

    TADtool is an interactive tool for the identification of meaningful parameters in TAD-calling algorithms for Hi-C data.

    vaquerizaslab/tadtool’s past year of commit activity
    Python 44 MIT 13 8 0 Updated Nov 16, 2022
  • Chang_et_al_Zebrafish_TEs Public
    vaquerizaslab/Chang_et_al_Zebrafish_TEs’s past year of commit activity
    Jupyter Notebook 10 4 0 0 Updated Nov 18, 2021
  • Ing-Simmons_et_al_dorsoventral_3D_genome Public
    vaquerizaslab/Ing-Simmons_et_al_dorsoventral_3D_genome’s past year of commit activity
    Python 6 MIT 4 0 0 Updated Apr 13, 2021
  • genomic_regions Public
    vaquerizaslab/genomic_regions’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Mar 24, 2021
  • fanc-manuscript Public
    vaquerizaslab/fanc-manuscript’s past year of commit activity
    Python 2 0 0 0 Updated Oct 23, 2020
  • zebrafish-3D-genome Public
    vaquerizaslab/zebrafish-3D-genome’s past year of commit activity
    0 0 0 0 Updated May 25, 2020
  • Hug-et-al-Cell-2017-Supp-Site Public

    Supplementary site for Hug CB, Grimaldi AG, Kruse K, Vaquerizas JM. (2017).

    vaquerizaslab/Hug-et-al-Cell-2017-Supp-Site’s past year of commit activity
    3 0 0 0 Updated May 18, 2017

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