| title | description | published | date | tags | editor |
|---|---|---|---|---|---|
PathoPhenoDB |
A database of pathogens and their phenotypes for diagnostic support in infections. |
true |
2020-08-21 14:44:50 UTC |
bacteria, database, phenotype, ontology, organism-specific, virus |
markdown |
PathoPhenoDB aims to support diagnosis of infectious diseases caused by known pathogens. The database relies on the pathogen-to-phenotype associations. Pathogen-disease relations are linked to disease-phenotypes by using text mining methods. {.is-info}
- PathoPhenoDB Main Page {.links-list}
- (8/21/2020; CJR) Emailed reference publication contact regarding improvements to the website (re. user-friendliness, not in response to technical issues; e.g., adding an interactive search sidebar to the data visualization on the Explore page)
- Simple tool for microbial pathogen phenotypes; more helpful for work focused on microbes associated with human pathogenesis/disease
Quick loading; intuitive search auto-complete drop-down, but best use results from slow* input of search term(s), as results are specific and limited to their curated database.
- PathoPhenoDB Help Help Page {.links-list}
- Kafkas, Ş., Abdelhakim, M., Hashish, Y., Kulmanov, M., Abdellatif, M., Schofield, P. N., & Hoehndorf, R. (2019). PathoPhenoDB, linking human pathogens to their phenotypes in support of infectious disease research.Scientific data, 6(1), 1-8. {.grid-list}