fix trackProvenance if there is no git file

MWTracker/__init__.py

@@ -5,20 +5,4 @@
 # @author: ajaver
 # """
 
-# import os
-# import sys
-
-# curr_script_dir = os.path.dirname(os.path.realpath(__file__))
-# movement_validation_dir = os.path.join(curr_script_dir, '..', '..', 'open-worm-analysis-toolbox')
-# movement_validation_dir = os.path.abspath(movement_validation_dir)
-# if not os.path.exists(movement_validation_dir):
-#     raise FileNotFoundError('%s does not exists. Introduce a valid path in the variable movement_validation_dir of the file config_param.py. \
-#     	The path must point to the openWorm movement_validation repository.' % movement_validation_dir)
-
-
-# sys.path.append(movement_validation_dir)
-
-# try:
-#     import open_worm_analysis_toolbox
-# except ImportError:
-#     raise ImportError('No module open_worm_analysis_toolbox in %s\nTake a look into MWTracker __init__ path' % movement_validation_dir)
+from .version import __version__

MWTracker/helperFunctions/trackProvenance.py

@@ -3,19 +3,22 @@
 import tables
 from git import Repo
 
-def getGitVersion(main_package):
+def getVersion(main_package):
     git_file = os.path.join((os.sep).join((main_package.__file__).split(os.sep)[0:-2]), '.git')
-    assert os.path.exists(git_file)
-    repo = Repo(git_file)
-    return repo.commit('HEAD').hexsha
+    try:
+        repo = Repo(git_file)
+        return repo.commit('HEAD').hexsha
+    except git.exc.NoSuchPathError:
+        return main_package.__version__
+
 
 
 def getGitCommitHash():
     import MWTracker
     import open_worm_analysis_toolbox
 
-    commits_hash = {'MWTracker':getGitVersion(MWTracker), 
-    'open_worm_analysis_toolbox':getGitVersion(open_worm_analysis_toolbox)}
+    commits_hash = {'MWTracker':getVersion(MWTracker), 
+    'open_worm_analysis_toolbox':getVersion(open_worm_analysis_toolbox)}
 
     return commits_hash
 

MWTracker/version.py

@@ -0,0 +1,2 @@
+# # -*- coding: utf-8 -*-
+__version__='0.1a0'

setup.py

@@ -2,8 +2,10 @@
 
 from setuptools import setup
 
+
+exec(open('MWTracker/version.py').read())
 setup(name='MWTracker',
-      version='1.0',
+      version=__version__,
       description='Multiworm Tracker',
       author='Avelino Javer',
       author_email='avelino.javer@imperial.ac.uk',