From 053572e6233655b65f78a0dbcff39451d23cd6e6 Mon Sep 17 00:00:00 2001 From: vict0rsch Date: Wed, 15 Jun 2022 16:46:54 +0200 Subject: [PATCH 1/5] Add `frontiers` paper source --- src/shared/js/utils/config.js | 1 + src/shared/js/utils/functions.js | 1 + src/shared/js/utils/paper.js | 10 ++++++++++ src/shared/js/utils/parsers.js | 29 +++++++++++++++++++++++++++++ 4 files changed, 41 insertions(+) diff --git a/src/shared/js/utils/config.js b/src/shared/js/utils/config.js index 1be960ea..87a9e482 100644 --- a/src/shared/js/utils/config.js +++ b/src/shared/js/utils/config.js @@ -138,6 +138,7 @@ global.knownPaperPages = { arxiv: ["arxiv.org/abs/", "arxiv.org/pdf/", "scirate.com/arxiv/"], biorxiv: ["biorxiv.org/content"], cvf: ["openaccess.thecvf.com/content"], + frontiers: ["frontiersin.org/articles"], ijcai: [(url) => /ijcai\.org\/proceedings\/\d{4}\/\d+/gi.test(url)], ieee: [ "ieeexplore.ieee.org/document/", diff --git a/src/shared/js/utils/functions.js b/src/shared/js/utils/functions.js index 434f774b..14b9d304 100644 --- a/src/shared/js/utils/functions.js +++ b/src/shared/js/utils/functions.js @@ -112,6 +112,7 @@ const isObject = (obj) => const isPdfUrl = (url) => { return ( url.endsWith(".pdf") || + url.endsWith("/pdf") || url.includes("openreview.net/pdf") || url.match(/\/e?pdf\//g) || url.includes("ieee.org/stamp/stamp.jsp?tp=&arnumber=") diff --git a/src/shared/js/utils/paper.js b/src/shared/js/utils/paper.js index c5a3d949..31fd5776 100644 --- a/src/shared/js/utils/paper.js +++ b/src/shared/js/utils/paper.js @@ -152,6 +152,10 @@ const paperToAbs = (paper) => { abs = `https://science.org/doi/full/${doi}`; break; + case "frontiers": + abs = pdf.replace(/\/pdf$/, "/full"); + break; + default: abs = "https://xkcd.com/1969/"; break; @@ -246,6 +250,9 @@ const paperToPDF = (paper) => { case "science": break; + case "frontiers": + break; + default: pdf = "https://xkcd.com/1969/"; break; @@ -760,6 +767,9 @@ const parseIdFromUrl = async (url) => { doi = doi.split("/").slice(1).join("/"); } idForUrl = findPaperId(papers, "science", miniHash(doi)); + } else if (is.frontiers) { + doi = noParamUrl(url).split("/articles/")[1].split("/").slice(0, -1).join("/"); + idForUrl = findPaperId(papers, "frontiers", miniHash(doi)); } else if (is.localFile) { idForUrl = is.localFile; } else { diff --git a/src/shared/js/utils/parsers.js b/src/shared/js/utils/parsers.js index c49d88e8..4f339fa8 100644 --- a/src/shared/js/utils/parsers.js +++ b/src/shared/js/utils/parsers.js @@ -1205,6 +1205,30 @@ const makeSciencePaper = async (url) => { return { author, bibtex, id, key, note, pdfLink, title, venue, year }; }; +const makeFrontiersPaper = async (url) => { + url = url.replace(/\/pdf$/, "/full"); + const doi = noParamUrl(url).split("/articles/")[1].split("/full")[0]; + const bib = await fetchText(`https://www.frontiersin.org/articles/${doi}/bibTex`); + const data = Object.fromEntries( + Object.entries(bibtexToObject(bib)).map(([k, v]) => [ + k === "citationKey" || k === "entryType" ? k : k.toLowerCase(), + v, + ]) + ); + data.author = flipAndAuthors(data.author); + delete data.abstract; + const { author, journal, year, title, citationKey } = data; + const bibtex = bibtexToString(data); + + const venue = journal; + const note = `Published @ ${venue} (${year})`; + const id = `Frontiers-${year}_${miniHash(doi)}`; + const key = citationKey; + const pdfLink = url.replace(/\/full$/, "/pdf"); + + return { author, bibtex, id, key, note, pdfLink, title, venue, year }; +}; + // ------------------------------- // ----- PREPRINT MATCHING ----- // ------------------------------- @@ -1605,6 +1629,11 @@ const makePaper = async (is, url) => { if (paper) { paper.source = "science"; } + } else if (is.frontiers) { + paper = await makeFrontiersPaper(url); + if (paper) { + paper.source = "frontiers"; + } } else { throw new Error("Unknown paper source: " + JSON.stringify({ is, url })); } From b90783422b11242376ece110e773831f563053a3 Mon Sep 17 00:00:00 2001 From: vict0rsch Date: Wed, 15 Jun 2022 16:47:05 +0200 Subject: [PATCH 2/5] remove log --- src/content_scripts/content_script.js | 1 - 1 file changed, 1 deletion(-) diff --git a/src/content_scripts/content_script.js b/src/content_scripts/content_script.js index 3f7e7367..b17d148c 100644 --- a/src/content_scripts/content_script.js +++ b/src/content_scripts/content_script.js @@ -749,7 +749,6 @@ const arxiv = async (checks) => { const results = await Promise.all([paperPromise, domReadyPromise]); paper = results[0]; - console.log("paper: ", paper); if (paper) { // a paper was parsed From 2a16d6659be25916072412898b042f130bd58671 Mon Sep 17 00:00:00 2001 From: vict0rsch Date: Wed, 15 Jun 2022 16:47:08 +0200 Subject: [PATCH 3/5] build --- src/shared/min/utils.min.js | 6 +++--- 1 file changed, 3 insertions(+), 3 deletions(-) diff --git a/src/shared/min/utils.min.js b/src/shared/min/utils.min.js index cd00d02a..89335669 100644 --- a/src/shared/min/utils.min.js +++ 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makeArxivPaper(t)).source="arxiv";else if(e.neurips)(a=await makeNeuripsPaper(t)).source="neurips";else if(e.cvf)(a=await makeCVFPaper(t)).source="cvf";else if(e.openreview)(a=await makeOpenReviewPaper(t)).source="openreview";else if(e.biorxiv)(a=await makeBioRxivPaper(t)).source="biorxiv";else if(e.pmlr)(a=await makePMLRPaper(t)).source="pmlr";else if(e.acl)(a=await makeACLPaper(t))&&(a.source="acl");else if(e.pnas)(a=await makePNASPaper(t))&&(a.source="pnas");else if(e.nature)(a=await makeNaturePaper(t))&&(a.source="nature");else if(e.acs)(a=await makeACSPaper(t))&&(a.source="acs");else if(e.iop)(a=await makeIOPPaper(t))&&(a.source="iop");else if(e.jmlr)(a=await makeJMLRPaper(t))&&(a.source="jmlr");else if(e.pmc)(a=await makePMCPaper(t))&&(a.source="pmc");else if(e.ijcai)(a=await makeIJCAIPaper(t))&&(a.source="ijcai");else if(e.acm)(a=await makeACMPaper(t))&&(a.source="acm");else if(e.ieee)(a=await makeIEEEPaper(t))&&(a.source="ieee");else if(e.springer)(a=await 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module&&null!=module.exports&&(dummyModule=module,dummyModule.exports={decodeHtml:decodeHtml,flipAuthor:flipAuthor,flipAndAuthors:flipAndAuthors,fetchArxivXML:fetchArxivXML,fetchCvfHTML:fetchCvfHTML,fetchOpenReviewNoteJSON:fetchOpenReviewNoteJSON,fetchOpenReviewForumJSON:fetchOpenReviewForumJSON,fetchDom:fetchDom,fetchText:fetchText,makeArxivPaper:makeArxivPaper,makeNeuripsPaper:makeNeuripsPaper,makeCVFPaper:makeCVFPaper,makeOpenReviewBibTex:makeOpenReviewBibTex,makeOpenReviewPaper:makeOpenReviewPaper,makeBioRxivPaper:makeBioRxivPaper,makePMLRPaper:makePMLRPaper,findACLValue:findACLValue,makeACLPaper:makeACLPaper,makePNASPaper:makePNASPaper,makeNaturePaper:makeNaturePaper,makeACSPaper:makeACSPaper,makeIOPPaper:makeIOPPaper,makeJMLRPaper:makeJMLRPaper,makePMCPaper:makePMCPaper,makePubMedPaper:makePubMedPaper,makeIJCAIPaper:makeIJCAIPaper,makeACMPaper:makeACMPaper,makeIEEEPaper:makeIEEEPaper,makeSpringerPaper:makeSpringerPaper,makeAPSPaper:makeAPSPaper,makeWileyPaper:makeWileyPaper,tryCrossRef:tryCrossRef,tryDBLP:tryDBLP,tryPreprintMatch:tryPreprintMatch,tryPWCMatch:tryPWCMatch,initPaper:initPaper,autoTagPaper:autoTagPaper,makePaper:makePaper,findFuzzyPaperMatch:findFuzzyPaperMatch,fetchCrossRefDataForDoi:fetchCrossRefDataForDoi,fetchSemanticsScholarDataForDoi:fetchSemanticsScholarDataForDoi}); \ No newline at end of file From 7fcd10b78af8243bffc71b2e35aaf4c23f033280 Mon Sep 17 00:00:00 2001 From: vict0rsch Date: Thu, 16 Jun 2022 10:03:59 +0200 Subject: [PATCH 4/5] bump version --- manifest.json | 2 +- src/popup/min/popup.min.html | 2 +- src/popup/popup.html | 9 ++++++++- 3 files changed, 10 insertions(+), 3 deletions(-) diff --git a/manifest.json b/manifest.json index 538aaa64..c699d674 100755 --- a/manifest.json +++ b/manifest.json @@ -1,6 +1,6 @@ { "name": "Paper Memory", - "version": "0.5.6", + "version": "0.5.7", "manifest_version": 2, "description": "Automatically record papers and their codes from Arxiv, OpenReview & more! Organize your library with tags, links and quick notes.", "homepage_url": "https://github.com/vict0rsch/PaperMemory", diff --git a/src/popup/min/popup.min.html b/src/popup/min/popup.min.html index 0b7cd4a7..6203ad45 100755 --- a/src/popup/min/popup.min.html +++ b/src/popup/min/popup.min.html @@ -1,2 +1,2 @@
\ No newline at end of file + @import url("https://fonts.googleapis.com/css2?family=Fira+Code:wght@300;400;500;600;700&display=swap");
\ No newline at end of file diff --git a/src/popup/popup.html b/src/popup/popup.html index 51be2338..cfddc26d 100755 --- a/src/popup/popup.html +++ b/src/popup/popup.html @@ -429,7 +429,14 @@

Search

What's new

  • Current: 0.5.6 + href="https://github.com/vict0rsch/PaperMemory/releases/tag/0.5.7">0.5.7 + (2022-06-13) +
      +
    • [new source] Add FrontiersIn paper source
      • +
    • [dev] Improve preprint/publication matching
      • +
    +
    • +
  • 0.5.6 (2022-06-13)
    • [feature] Add paper code to arxiv.org's rightmost column
      • From 632eca741da249a9a4cf30ee6dfedf2aa1fdb68a Mon Sep 17 00:00:00 2001 From: vict0rsch Date: Thu, 16 Jun 2022 10:28:10 +0200 Subject: [PATCH 5/5] add `frontiers` tests --- test/data/urls.json | 7 +++++++ test/test-storage.js | 6 ++++++ 2 files changed, 13 insertions(+) diff --git a/test/data/urls.json b/test/data/urls.json index fb4e96e0..0c0b0204 100644 --- a/test/data/urls.json +++ b/test/data/urls.json @@ -47,6 +47,13 @@ "venue": "cvpr" } ], + "frontiers": [ + "https://www.frontiersin.org/articles/10.3389/fpace.2022.892330/full", + "https://www.frontiersin.org/articles/10.3389/fpace.2022.892330/pdf", + { + "noPdf": true + } + ], "ijcai": [ "https://www.ijcai.org/proceedings/2020/1", "https://www.ijcai.org/proceedings/2020/0001.pdf", diff --git a/test/test-storage.js b/test/test-storage.js index 42da62d8..18c86537 100644 --- a/test/test-storage.js +++ b/test/test-storage.js @@ -100,6 +100,12 @@ describe("Test paper detection and storage", function () { `prevents automated browsing` ); delete urls[source]; + } else if (targets.length === 3 && targets[2].noPdf) { + console.log( + `\n>>> Skipping test for ${source} because its ` + + `pdf page does not exist` + ); + delete urls[source]; } }