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BL-HiChIP

This pipeline has been deprecated as of August 2021. Please update your pipelines to the official nextflow pipeline at https://github.com/wbszhu/HiTag.

We recommend transitioning to the nextflow version since it easier to install.

Usage

for example

python3 format.py AH-1.BL-hichip.sh
nohup bash AH-1.BL-hichip.sh  > AH-1 2>&1&