Lintify sourcextractor #2118
Workflow file for this run
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| # This is a basic workflow to help you get started with Actions | |
| name: CI | |
| # Controls when the action will run. | |
| on: | |
| # Triggers the workflow on push or pull request events but only for the master branch | |
| push: | |
| pull_request: | |
| merge_group: | |
| # run the pipeline on the 0th minute of the 0th hour of day 1 and 15 every month | |
| schedule: | |
| - cron: '0 0 1,15 * *' | |
| # Allows you to run this workflow manually from the Actions tab | |
| workflow_dispatch: | |
| # A workflow run is made up of one or more jobs that can run sequentially or in parallel | |
| jobs: | |
| # This workflow contains a single job called "build" | |
| ci: | |
| # The type of runner that the job will run on | |
| runs-on: ubuntu-22.04 | |
| # Specify the python versions to test | |
| strategy: | |
| matrix: | |
| python-version: ["3.10", "3.11"] | |
| # Steps represent a sequence of tasks that will be executed as part of the job | |
| steps: | |
| # Checks-out your repository under $GITHUB_WORKSPACE, so your job can access it | |
| - uses: actions/checkout@v3 | |
| - name: Install poetry | |
| run: pipx install poetry | |
| # Set up the python versions | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| cache: "poetry" | |
| # Runs a set of commands using the runners shell | |
| - name: set up ssh | |
| uses: webfactory/ssh-agent@v0.5.4 | |
| with: | |
| ssh-private-key: | | |
| ${{ secrets.WIRC_STARTERPACK_TOKEN }} | |
| - name: install packages | |
| run: | | |
| sudo apt-get update | |
| sudo apt-get install -y sextractor scamp swarp build-essential | |
| echo "deb http://ftp.us.debian.org/debian sid main" | sudo tee -a /etc/apt/sources.list | |
| sudo apt-key adv --keyserver keyserver.ubuntu.com --recv-keys 648ACFD622F3D138 | |
| sudo apt-key adv --keyserver keyserver.ubuntu.com --recv-keys 0E98404D386FA1D9 | |
| sudo apt-get update && sudo apt-get install -y psfex | |
| sudo ln -s /usr/bin/source-extractor /usr/bin/sex | |
| sudo ln -s /usr/bin/SWarp /usr/bin/swarp | |
| echo `sex --version` | |
| echo `scamp --version` | |
| echo `swarp --version` | |
| echo `psfex --version` | |
| pip install --upgrade pip | |
| python -m pip install --upgrade poetry coveralls | |
| poetry install | |
| # Set up database | |
| - name: postgres | |
| run: | | |
| sudo apt install postgresql | |
| sudo service postgresql restart | |
| sudo -u postgres psql -c "create user runner; grant all privileges on database postgres to runner; ALTER USER runner WITH SUPERUSER;" | |
| # First make sure the doc tests are up to date | |
| - name: Run doc tests | |
| run: | | |
| poetry run make -C docs/ doctest | |
| # Runs a set of commands using the runners shell | |
| - name: Test the code | |
| env: | |
| OUTPUT_DATA_DIR : /home/runner/ | |
| PG_ADMIN_USER: runner | |
| PG_ADMIN_PWD: "" | |
| DB_USER: runner | |
| DB_PWD: "" | |
| WATCHDOG_EMAIL: ${{ secrets.WATCHDOG_EMAIL }} | |
| WATCHDOG_EMAIL_PASSWORD: ${{ secrets.WATCHDOG_EMAIL_PASSWORD }} | |
| WATCHDOG_EMAIL_RECIPIENTS: ${{ secrets.WATCHDOG_EMAIL_RECIPIENTS }} | |
| KOWALSKI_TOKEN: ${{ secrets.KOWALSKI_TOKEN }} | |
| FRITZ_TOKEN: ${{ secrets.FRITZ_TOKEN }} | |
| run: | | |
| TESTDATA_CHECK="True" poetry run coverage run -m unittest discover tests/ | |
| - name: Run Coveralls | |
| if: ${{ success() }} | |
| run: | | |
| poetry run coveralls --service=github | |
| env: | |
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| - name: Echo tag name | |
| run: echo "Tag is ${{ github.ref }}, Tagged is ${{ startsWith(github.ref, 'refs/tags/')}}, Python Check is ${{matrix.python-version == 3.10}}, Deploy is ${{ startsWith(github.ref, 'refs/tags/') && matrix.python-version == 3.10}}" | |
| # Build a tarball and push to Pypi if tagged with new version | |
| - name: Build and publish | |
| if: ${{ startsWith(github.ref, 'refs/tags/') && success() && matrix.python-version == 3.11}} | |
| run: | | |
| poetry publish -n --build | |
| env: | |
| POETRY_PYPI_TOKEN_PYPI: ${{ secrets.PYPI_API_TOKEN }} |