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1. NeoEnrichment NeoEnrichment Public

   R package to do enrichment analysis for neoantigens

   R 12 2

2. XSLiuLab/ecDNA_immune XSLiuLab/ecDNA_immune Public

   Extrachromosomal DNA is associated with decreased immune cell infiltration and antigen presentation, represents a potential cancer immune evasion mechanism

   HTML 7 3

3. XSLiuLab/Immunoediting XSLiuLab/Immunoediting Public

   Pan-cancer quantification of neoantigen-mediated immunoediting in cancer evolution

   HTML 10 1

4. XSLiuLab/Neodb XSLiuLab/Neodb Public

   Shiny Web Server and Database for Neoantigen discovery

   Jupyter Notebook 3

5. CAR-Toner CAR-Toner Public

   ESM2 based fine-tuned model for PCP prediction

   R 2 1

6. XSLiuLab/DeepMeta XSLiuLab/DeepMeta Public

   Precise metabolic dependencies of cancer through deep learning

   Jupyter Notebook 1